Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Rpl13a-ps1A0A140T8K2 Gm15546-201ENSMUST00000122095 826 ntBASIC18.59■□□□□ 0.57
Rpl13a-ps1A0A140T8K2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.58■□□□□ 0.57
Rpl13a-ps1A0A140T8K2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl13a-ps1A0A140T8K2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Rpl13a-ps1A0A140T8K2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gm22567-201ENSMUST00000175542 342 ntBASIC18.54■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpl13a-ps1A0A140T8K2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.49■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.47■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpl13a-ps1A0A140T8K2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm43566-201ENSMUST00000196851 808 ntBASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm15039-201ENSMUST00000118914 875 ntBASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Rpl13a-ps1A0A140T8K2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms