Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8n-2A0A075B633 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav8n-2A0A075B633 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8n-2A0A075B633 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav8n-2A0A075B633 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Trav8n-2A0A075B633 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav8n-2A0A075B633 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8n-2A0A075B633 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trav8n-2A0A075B633 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav8n-2A0A075B633 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Trav8n-2A0A075B633 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav8n-2A0A075B633 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8n-2A0A075B633 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trav8n-2A0A075B633 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8n-2A0A075B633 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trav8n-2A0A075B633 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8n-2A0A075B633 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8n-2A0A075B633 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.64■□□□□ 0.89
Trav8n-2A0A075B633 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav8n-2A0A075B633 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.64■□□□□ 0.89
Trav8n-2A0A075B633 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8n-2A0A075B633 Gm9959-201ENSMUST00000068277 390 ntBASIC20.63■□□□□ 0.89
Trav8n-2A0A075B633 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav8n-2A0A075B633 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav8n-2A0A075B633 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.62■□□□□ 0.89
Trav8n-2A0A075B633 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.62■□□□□ 0.89
Trav8n-2A0A075B633 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav8n-2A0A075B633 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trav8n-2A0A075B633 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8n-2A0A075B633 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8n-2A0A075B633 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8n-2A0A075B633 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav8n-2A0A075B633 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8n-2A0A075B633 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav8n-2A0A075B633 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8n-2A0A075B633 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trav8n-2A0A075B633 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav8n-2A0A075B633 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav8n-2A0A075B633 Gm10232-201ENSMUST00000089221 720 ntBASIC20.59■□□□□ 0.89
Trav8n-2A0A075B633 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8n-2A0A075B633 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8n-2A0A075B633 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trav8n-2A0A075B633 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.58■□□□□ 0.89
Trav8n-2A0A075B633 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trav8n-2A0A075B633 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav8n-2A0A075B633 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav8n-2A0A075B633 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trav8n-2A0A075B633 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav8n-2A0A075B633 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8n-2A0A075B633 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8n-2A0A075B633 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.56■□□□□ 0.88
Trav8n-2A0A075B633 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8n-2A0A075B633 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav8n-2A0A075B633 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav8n-2A0A075B633 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8n-2A0A075B633 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trav8n-2A0A075B633 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav8n-2A0A075B633 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 Etf1-202ENSMUST00000180351 108 ntBASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav8n-2A0A075B633 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trav8n-2A0A075B633 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.52■□□□□ 0.87
Trav8n-2A0A075B633 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav8n-2A0A075B633 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8n-2A0A075B633 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8n-2A0A075B633 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8n-2A0A075B633 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav8n-2A0A075B633 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.5■□□□□ 0.87
Trav8n-2A0A075B633 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8n-2A0A075B633 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav8n-2A0A075B633 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
Trav8n-2A0A075B633 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms