Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rab43Q8CG50 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Rab43Q8CG50 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab43Q8CG50 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rab43Q8CG50 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.07■■□□□ 1.12
Rab43Q8CG50 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Rab43Q8CG50 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rab43Q8CG50 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Rab43Q8CG50 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
Rab43Q8CG50 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Rab43Q8CG50 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Rab43Q8CG50 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
Rab43Q8CG50 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Rab43Q8CG50 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC22.05■■□□□ 1.12
Rab43Q8CG50 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.05■■□□□ 1.12
Rab43Q8CG50 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.04■■□□□ 1.12
Rab43Q8CG50 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Rab43Q8CG50 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Rab43Q8CG50 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Rab43Q8CG50 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Rab43Q8CG50 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Rab43Q8CG50 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rab43Q8CG50 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rab43Q8CG50 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Rab43Q8CG50 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Rab43Q8CG50 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Rab43Q8CG50 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Rab43Q8CG50 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Rab43Q8CG50 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rab43Q8CG50 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Rab43Q8CG50 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rab43Q8CG50 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Rab43Q8CG50 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rab43Q8CG50 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rab43Q8CG50 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Rab43Q8CG50 Gm5522-201ENSMUST00000189483 1242 ntBASIC22■■□□□ 1.11
Rab43Q8CG50 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rab43Q8CG50 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Rab43Q8CG50 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.99■■□□□ 1.11
Rab43Q8CG50 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.99■■□□□ 1.11
Rab43Q8CG50 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.99■■□□□ 1.11
Rab43Q8CG50 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab43Q8CG50 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab43Q8CG50 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.98■■□□□ 1.11
Rab43Q8CG50 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.98■■□□□ 1.11
Rab43Q8CG50 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.98■■□□□ 1.11
Rab43Q8CG50 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Rab43Q8CG50 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rab43Q8CG50 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Rab43Q8CG50 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Rab43Q8CG50 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Gm22567-201ENSMUST00000175542 342 ntBASIC21.96■■□□□ 1.11
Rab43Q8CG50 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.96■■□□□ 1.11
Rab43Q8CG50 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Rab43Q8CG50 Gm43566-201ENSMUST00000196851 808 ntBASIC21.95■■□□□ 1.1
Rab43Q8CG50 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rab43Q8CG50 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rab43Q8CG50 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Rab43Q8CG50 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rab43Q8CG50 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Gm45444-201ENSMUST00000211394 898 ntBASIC21.93■■□□□ 1.1
Rab43Q8CG50 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rab43Q8CG50 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rab43Q8CG50 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Rab43Q8CG50 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rab43Q8CG50 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Rab43Q8CG50 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.9■■□□□ 1.1
Rab43Q8CG50 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Rab43Q8CG50 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.89■■□□□ 1.1
Rab43Q8CG50 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Rab43Q8CG50 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rab43Q8CG50 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rab43Q8CG50 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Rab43Q8CG50 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.89■■□□□ 1.09
Rab43Q8CG50 Gm13238-201ENSMUST00000117655 780 ntBASIC21.88■■□□□ 1.09
Rab43Q8CG50 Gm15820-201ENSMUST00000201566 728 ntBASIC21.88■■□□□ 1.09
Rab43Q8CG50 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.88■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms