Protein–RNA interactions for Protein: Q8BHB0

Nod1, Nucleotide-binding oligomerization domain-containing protein 1, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nod1Q8BHB0 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.81■■□□□ 1.4
Nod1Q8BHB0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.8■■□□□ 1.4
Nod1Q8BHB0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nod1Q8BHB0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.8■■□□□ 1.4
Nod1Q8BHB0 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.8■■□□□ 1.4
Nod1Q8BHB0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nod1Q8BHB0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Nod1Q8BHB0 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nod1Q8BHB0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Nod1Q8BHB0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nod1Q8BHB0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Nod1Q8BHB0 Nsd1-203ENSMUST00000224156 1149 ntBASIC23.77■■□□□ 1.4
Nod1Q8BHB0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nod1Q8BHB0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nod1Q8BHB0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nod1Q8BHB0 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nod1Q8BHB0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nod1Q8BHB0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Nod1Q8BHB0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nod1Q8BHB0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nod1Q8BHB0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.75■■□□□ 1.39
Nod1Q8BHB0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.75■■□□□ 1.39
Nod1Q8BHB0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nod1Q8BHB0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC23.74■■□□□ 1.39
Nod1Q8BHB0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nod1Q8BHB0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nod1Q8BHB0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nod1Q8BHB0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Gm15820-201ENSMUST00000201566 728 ntBASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nod1Q8BHB0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nod1Q8BHB0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.71■■□□□ 1.39
Nod1Q8BHB0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nod1Q8BHB0 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nod1Q8BHB0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC23.7■■□□□ 1.38
Nod1Q8BHB0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nod1Q8BHB0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nod1Q8BHB0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nod1Q8BHB0 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nod1Q8BHB0 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Nod1Q8BHB0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nod1Q8BHB0 Gm13238-201ENSMUST00000117655 780 ntBASIC23.67■■□□□ 1.38
Nod1Q8BHB0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Nod1Q8BHB0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Gm43566-201ENSMUST00000196851 808 ntBASIC23.66■■□□□ 1.38
Nod1Q8BHB0 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nod1Q8BHB0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.65■■□□□ 1.38
Nod1Q8BHB0 Gm45444-201ENSMUST00000211394 898 ntBASIC23.65■■□□□ 1.38
Nod1Q8BHB0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Nod1Q8BHB0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Nod1Q8BHB0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nod1Q8BHB0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nod1Q8BHB0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nod1Q8BHB0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nod1Q8BHB0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nod1Q8BHB0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nod1Q8BHB0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Nod1Q8BHB0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Nod1Q8BHB0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nod1Q8BHB0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Nod1Q8BHB0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms