Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx4Q61496 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx4Q61496 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx4Q61496 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx4Q61496 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx4Q61496 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx4Q61496 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx4Q61496 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.28■■□□□ 1.64
Ddx4Q61496 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.28■■□□□ 1.64
Ddx4Q61496 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx4Q61496 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Ddx4Q61496 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx4Q61496 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx4Q61496 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
Ddx4Q61496 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.26■■□□□ 1.63
Ddx4Q61496 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx4Q61496 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.26■■□□□ 1.63
Ddx4Q61496 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
Ddx4Q61496 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx4Q61496 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx4Q61496 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.25■■□□□ 1.63
Ddx4Q61496 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx4Q61496 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
Ddx4Q61496 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx4Q61496 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.24■■□□□ 1.63
Ddx4Q61496 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx4Q61496 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx4Q61496 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx4Q61496 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Ddx4Q61496 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.22■■□□□ 1.63
Ddx4Q61496 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.22■■□□□ 1.63
Ddx4Q61496 Gm9959-201ENSMUST00000068277 390 ntBASIC25.22■■□□□ 1.63
Ddx4Q61496 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx4Q61496 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx4Q61496 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx4Q61496 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx4Q61496 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Ddx4Q61496 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx4Q61496 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.2■■□□□ 1.62
Ddx4Q61496 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.2■■□□□ 1.62
Ddx4Q61496 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.2■■□□□ 1.62
Ddx4Q61496 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.18■■□□□ 1.62
Ddx4Q61496 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx4Q61496 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx4Q61496 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Ddx4Q61496 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx4Q61496 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx4Q61496 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx4Q61496 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.17■■□□□ 1.62
Ddx4Q61496 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx4Q61496 Amer2-203ENSMUST00000225247 2662 ntBASIC25.17■■□□□ 1.62
Ddx4Q61496 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx4Q61496 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx4Q61496 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
Ddx4Q61496 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx4Q61496 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx4Q61496 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.15■■□□□ 1.62
Ddx4Q61496 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC25.15■■□□□ 1.62
Ddx4Q61496 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.15■■□□□ 1.62
Ddx4Q61496 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Ddx4Q61496 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx4Q61496 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx4Q61496 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx4Q61496 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Ddx4Q61496 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.61
Ddx4Q61496 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Ddx4Q61496 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC25.13■■□□□ 1.61
Ddx4Q61496 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.13■■□□□ 1.61
Ddx4Q61496 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.13■■□□□ 1.61
Ddx4Q61496 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Ddx4Q61496 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx4Q61496 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx4Q61496 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx4Q61496 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
Ddx4Q61496 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx4Q61496 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx4Q61496 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC25.1■■□□□ 1.61
Ddx4Q61496 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx4Q61496 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx4Q61496 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx4Q61496 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx4Q61496 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC25.09■■□□□ 1.61
Ddx4Q61496 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx4Q61496 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Ddx4Q61496 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx4Q61496 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx4Q61496 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.07■■□□□ 1.6
Ddx4Q61496 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx4Q61496 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Ddx4Q61496 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx4Q61496 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Ddx4Q61496 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx4Q61496 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC25.05■■□□□ 1.6
Ddx4Q61496 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx4Q61496 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx4Q61496 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx4Q61496 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC25.04■■□□□ 1.6
Ddx4Q61496 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx4Q61496 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx4Q61496 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms