Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.84■□□□□ 0.93
Urb1Q571H0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.84■□□□□ 0.93
Urb1Q571H0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Urb1Q571H0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Urb1Q571H0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.83■□□□□ 0.92
Urb1Q571H0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.82■□□□□ 0.92
Urb1Q571H0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Urb1Q571H0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.81■□□□□ 0.92
Urb1Q571H0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Urb1Q571H0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Urb1Q571H0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Urb1Q571H0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.8■□□□□ 0.92
Urb1Q571H0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Urb1Q571H0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.8■□□□□ 0.92
Urb1Q571H0 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Urb1Q571H0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Urb1Q571H0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Urb1Q571H0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Urb1Q571H0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Urb1Q571H0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.79■□□□□ 0.92
Urb1Q571H0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.79■□□□□ 0.92
Urb1Q571H0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Urb1Q571H0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Urb1Q571H0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Urb1Q571H0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Urb1Q571H0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Urb1Q571H0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Urb1Q571H0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Urb1Q571H0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Urb1Q571H0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Urb1Q571H0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Urb1Q571H0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Urb1Q571H0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.77■□□□□ 0.91
Urb1Q571H0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.76■□□□□ 0.91
Urb1Q571H0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Urb1Q571H0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.76■□□□□ 0.91
Urb1Q571H0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Urb1Q571H0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.76■□□□□ 0.91
Urb1Q571H0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.76■□□□□ 0.91
Urb1Q571H0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Urb1Q571H0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Urb1Q571H0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Urb1Q571H0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Urb1Q571H0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.74■□□□□ 0.91
Urb1Q571H0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Urb1Q571H0 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Urb1Q571H0 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.74■□□□□ 0.91
Urb1Q571H0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.73■□□□□ 0.91
Urb1Q571H0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Urb1Q571H0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.73■□□□□ 0.91
Urb1Q571H0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.73■□□□□ 0.91
Urb1Q571H0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Urb1Q571H0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Urb1Q571H0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Urb1Q571H0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Urb1Q571H0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Urb1Q571H0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Urb1Q571H0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Urb1Q571H0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.69■□□□□ 0.9
Urb1Q571H0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Urb1Q571H0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Urb1Q571H0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Urb1Q571H0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Urb1Q571H0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.67■□□□□ 0.9
Urb1Q571H0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Urb1Q571H0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Urb1Q571H0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Urb1Q571H0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Urb1Q571H0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Urb1Q571H0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Urb1Q571H0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Urb1Q571H0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Urb1Q571H0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.65■□□□□ 0.9
Urb1Q571H0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Urb1Q571H0 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.64■□□□□ 0.89
Urb1Q571H0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Urb1Q571H0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Urb1Q571H0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Urb1Q571H0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.64■□□□□ 0.89
Urb1Q571H0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Urb1Q571H0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Urb1Q571H0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Urb1Q571H0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.62■□□□□ 0.89
Urb1Q571H0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Urb1Q571H0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.62■□□□□ 0.89
Urb1Q571H0 Gm10232-201ENSMUST00000089221 720 ntBASIC20.62■□□□□ 0.89
Urb1Q571H0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Urb1Q571H0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Urb1Q571H0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Urb1Q571H0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Urb1Q571H0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Urb1Q571H0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.61■□□□□ 0.89
Urb1Q571H0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Urb1Q571H0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Urb1Q571H0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms