Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 SGE1YPR198W 1632 nt6.52□□□□□ -1.37
RRP40Q08285 YIP4YGL198W 708 nt6.52□□□□□ -1.37
RRP40Q08285 YOS9YDR057W 1629 nt6.51□□□□□ -1.37
RRP40Q08285 YPR076WYPR076W 375 nt6.51□□□□□ -1.37
RRP40Q08285 MSG5YNL053W 1470 nt6.51□□□□□ -1.37
RRP40Q08285 YLL058WYLL058W 1728 nt6.5□□□□□ -1.37
RRP40Q08285 RQC1YDR333C 2172 nt6.5□□□□□ -1.37
RRP40Q08285 DLD1YDL174C 1764 nt6.49□□□□□ -1.37
RRP40Q08285 DAL7YIR031C 1665 nt6.49□□□□□ -1.37
RRP40Q08285 IRC5YFR038W 2562 nt6.49□□□□□ -1.37
RRP40Q08285 HHY1YEL059W 309 nt6.49□□□□□ -1.37
RRP40Q08285 AGX1YFL030W 1158 nt6.49□□□□□ -1.37
RRP40Q08285 MIX17YMR002W 471 nt6.49□□□□□ -1.37
RRP40Q08285 TDP1YBR223C 1635 nt6.49□□□□□ -1.37
RRP40Q08285 SEC23YPR181C 2307 nt6.49□□□□□ -1.37
RRP40Q08285 PPH21YDL134C 1110 nt6.48□□□□□ -1.37
RRP40Q08285 YJR154WYJR154W 1041 nt6.48□□□□□ -1.37
RRP40Q08285 NUP84YDL116W 2181 nt6.48□□□□□ -1.37
RRP40Q08285 VBA5YKR105C 1749 nt6.47□□□□□ -1.37
RRP40Q08285 KIN1YDR122W 3195 nt6.47□□□□□ -1.37
RRP40Q08285 CYS4YGR155W 1524 nt6.47□□□□□ -1.37
RRP40Q08285 REC107YJR021C 945 nt6.47□□□□□ -1.37
RRP40Q08285 SPG5YMR191W 1122 nt6.47□□□□□ -1.37
RRP40Q08285 YOR111WYOR111W 699 nt6.47□□□□□ -1.37
RRP40Q08285 NUP49YGL172W 1419 nt6.47□□□□□ -1.37
RRP40Q08285 ERG12YMR208W 1332 nt6.47□□□□□ -1.37
RRP40Q08285 YCR041WYCR041W 333 nt6.46□□□□□ -1.38
RRP40Q08285 LIA1YJR070C 978 nt6.46□□□□□ -1.38
RRP40Q08285 HOC1YJR075W 1191 nt6.46□□□□□ -1.38
RRP40Q08285 ASR1YPR093C 867 nt6.46□□□□□ -1.38
RRP40Q08285 EFM1YHL039W 1758 nt6.46□□□□□ -1.38
RRP40Q08285 PAC10YGR078C 600 nt6.45□□□□□ -1.38
RRP40Q08285 PTC7YHR076W 1032 nt6.45□□□□□ -1.38
RRP40Q08285 YLR112WYLR112W 420 nt6.45□□□□□ -1.38
RRP40Q08285 YOR012WYOR012W 414 nt6.45□□□□□ -1.38
RRP40Q08285 YGL102CYGL102C 429 nt6.44□□□□□ -1.38
RRP40Q08285 SNF4YGL115W 969 nt6.44□□□□□ -1.38
RRP40Q08285 PRI1YIR008C 1230 nt6.44□□□□□ -1.38
RRP40Q08285 ICP55YER078C 1536 nt6.44□□□□□ -1.38
RRP40Q08285 FCY22YER060W-A 1593 nt6.44□□□□□ -1.38
RRP40Q08285 MSC3YLR219W 2187 nt6.43□□□□□ -1.38
RRP40Q08285 YLL056CYLL056C 897 nt6.43□□□□□ -1.38
RRP40Q08285 FMP40YPL222W 2067 nt6.43□□□□□ -1.38
RRP40Q08285 CIR2YOR356W 1896 nt6.43□□□□□ -1.38
RRP40Q08285 MRPS28YDR337W 861 nt6.42□□□□□ -1.38
RRP40Q08285 SNT309YPR101W 528 nt6.42□□□□□ -1.38
RRP40Q08285 SMX3YPR182W 261 nt6.42□□□□□ -1.38
RRP40Q08285 AIM2YAL049C 741 nt6.41□□□□□ -1.38
RRP40Q08285 RPL31BYLR406C 342 nt6.41□□□□□ -1.38
RRP40Q08285 CRH1YGR189C 1524 nt6.4□□□□□ -1.38
RRP40Q08285 GPD1YDL022W 1176 nt6.4□□□□□ -1.38
RRP40Q08285 ECM30YLR436C 3825 nt6.4□□□□□ -1.38
RRP40Q08285 MRPL19YNL185C 477 nt6.4□□□□□ -1.38
RRP40Q08285 RRN10YBL025W 438 nt6.39□□□□□ -1.39
RRP40Q08285 CEM1YER061C 1329 nt6.39□□□□□ -1.39
RRP40Q08285 SKY1YMR216C 2229 nt6.39□□□□□ -1.39
RRP40Q08285 ECM27YJR106W 2178 nt6.38□□□□□ -1.39
RRP40Q08285 RSP5YER125W 2430 nt6.38□□□□□ -1.39
RRP40Q08285 TRS31YDR472W 852 nt6.38□□□□□ -1.39
RRP40Q08285 RPL2BYIL018W 765 nt6.38□□□□□ -1.39
RRP40Q08285 EMP65YER140W 1671 nt6.38□□□□□ -1.39
RRP40Q08285 AMN1YBR158W 1650 nt6.38□□□□□ -1.39
RRP40Q08285 YEN1YER041W 2280 nt6.37□□□□□ -1.39
RRP40Q08285 YBR113WYBR113W 483 nt6.37□□□□□ -1.39
RRP40Q08285 DAL4YIR028W 1908 nt6.37□□□□□ -1.39
RRP40Q08285 PAC2YER007W 1557 nt6.36□□□□□ -1.39
RRP40Q08285 YMR034CYMR034C 1305 nt6.36□□□□□ -1.39
RRP40Q08285 TUF1YOR187W 1314 nt6.36□□□□□ -1.39
RRP40Q08285 MRPL35YDR322W 1104 nt6.36□□□□□ -1.39
RRP40Q08285 MRPL28YDR462W 444 nt6.36□□□□□ -1.39
RRP40Q08285 LCL3YGL085W 825 nt6.36□□□□□ -1.39
RRP40Q08285 ASF1YJL115W 840 nt6.36□□□□□ -1.39
RRP40Q08285 SWD1YAR003W 1281 nt6.36□□□□□ -1.39
RRP40Q08285 LSC1YOR142W 990 nt6.36□□□□□ -1.39
RRP40Q08285 SEC62YPL094C 825 nt6.36□□□□□ -1.39
RRP40Q08285 SMK1YPR054W 1167 nt6.36□□□□□ -1.39
RRP40Q08285 MTR3YGR158C 753 nt6.35□□□□□ -1.39
RRP40Q08285 YSC83YHR017W 1158 nt6.35□□□□□ -1.39
RRP40Q08285 CBR1YIL043C 855 nt6.35□□□□□ -1.39
RRP40Q08285 CLN1YMR199W 1641 nt6.35□□□□□ -1.39
RRP40Q08285 QCR6YFR033C 444 nt6.34□□□□□ -1.39
RRP40Q08285 FMO1YHR176W 1299 nt6.34□□□□□ -1.39
RRP40Q08285 YKL018C-AYKL018C-A 300 nt6.34□□□□□ -1.39
RRP40Q08285 URH1YDR400W 1023 nt6.33□□□□□ -1.4
RRP40Q08285 TMA46YOR091W 1038 nt6.33□□□□□ -1.4
RRP40Q08285 DOT1YDR440W 1749 nt6.33□□□□□ -1.4
RRP40Q08285 MCH2YKL221W 1422 nt6.33□□□□□ -1.4
RRP40Q08285 HED1YDR014W-A 489 nt6.32□□□□□ -1.4
RRP40Q08285 YIL029W-AYIL029W-A 372 nt6.32□□□□□ -1.4
RRP40Q08285 YKL077WYKL077W 1179 nt6.32□□□□□ -1.4
RRP40Q08285 YDL177CYDL177C 513 nt6.31□□□□□ -1.4
RRP40Q08285 PMP3YDR276C 168 nt6.31□□□□□ -1.4
RRP40Q08285 AIM20YIL158W 615 nt6.31□□□□□ -1.4
RRP40Q08285 YKL102CYKL102C 306 nt6.31□□□□□ -1.4
RRP40Q08285 TAF9YMR236W 474 nt6.31□□□□□ -1.4
RRP40Q08285 MRPS18YNL306W 654 nt6.31□□□□□ -1.4
RRP40Q08285 SAL1YNL083W 1485 nt6.3□□□□□ -1.4
RRP40Q08285 ERS1YCR075C 783 nt6.3□□□□□ -1.4
RRP40Q08285 TPK1YJL164C 1194 nt6.3□□□□□ -1.4
RRP40Q08285 ARC35YNR035C 1029 nt6.3□□□□□ -1.4
Retrieved 100 of 7,029 protein–RNA pairs in 37.2 ms