Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh11P55288 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh11P55288 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh11P55288 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh11P55288 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cdh11P55288 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh11P55288 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh11P55288 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cdh11P55288 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.33■□□□□ 0.84
Cdh11P55288 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh11P55288 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh11P55288 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh11P55288 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh11P55288 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cdh11P55288 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cdh11P55288 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh11P55288 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cdh11P55288 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.31■□□□□ 0.84
Cdh11P55288 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.31■□□□□ 0.84
Cdh11P55288 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.31■□□□□ 0.84
Cdh11P55288 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh11P55288 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.3■□□□□ 0.84
Cdh11P55288 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh11P55288 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh11P55288 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cdh11P55288 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cdh11P55288 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh11P55288 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cdh11P55288 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cdh11P55288 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cdh11P55288 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cdh11P55288 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cdh11P55288 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh11P55288 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh11P55288 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cdh11P55288 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cdh11P55288 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh11P55288 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.26■□□□□ 0.83
Cdh11P55288 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh11P55288 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh11P55288 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh11P55288 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cdh11P55288 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cdh11P55288 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Cdh11P55288 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cdh11P55288 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.25■□□□□ 0.83
Cdh11P55288 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cdh11P55288 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cdh11P55288 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cdh11P55288 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh11P55288 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.23■□□□□ 0.83
Cdh11P55288 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cdh11P55288 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Cdh11P55288 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh11P55288 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cdh11P55288 Gm6311-201ENSMUST00000073790 878 ntBASIC20.23■□□□□ 0.83
Cdh11P55288 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
Cdh11P55288 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Cdh11P55288 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh11P55288 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh11P55288 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cdh11P55288 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cdh11P55288 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.21■□□□□ 0.83
Cdh11P55288 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Cdh11P55288 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cdh11P55288 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cdh11P55288 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cdh11P55288 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh11P55288 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh11P55288 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cdh11P55288 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh11P55288 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh11P55288 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cdh11P55288 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cdh11P55288 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Cdh11P55288 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdh11P55288 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms