Protein–RNA interactions for Protein: P0C1T1

Hoxb2, Homeobox protein Hox-B2, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb2P0C1T1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb2P0C1T1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.64■□□□□ 0.74
Hoxb2P0C1T1 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb2P0C1T1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.64■□□□□ 0.74
Hoxb2P0C1T1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Hoxb2P0C1T1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb2P0C1T1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb2P0C1T1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Hoxb2P0C1T1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb2P0C1T1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hoxb2P0C1T1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb2P0C1T1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxb2P0C1T1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb2P0C1T1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.6■□□□□ 0.73
Hoxb2P0C1T1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb2P0C1T1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb2P0C1T1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb2P0C1T1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb2P0C1T1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb2P0C1T1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb2P0C1T1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb2P0C1T1 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Hoxb2P0C1T1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb2P0C1T1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb2P0C1T1 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb2P0C1T1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb2P0C1T1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb2P0C1T1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hoxb2P0C1T1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hoxb2P0C1T1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb2P0C1T1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb2P0C1T1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.54■□□□□ 0.72
Hoxb2P0C1T1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb2P0C1T1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hoxb2P0C1T1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb2P0C1T1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxb2P0C1T1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb2P0C1T1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.52■□□□□ 0.72
Hoxb2P0C1T1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxb2P0C1T1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb2P0C1T1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.5■□□□□ 0.71
Hoxb2P0C1T1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hoxb2P0C1T1 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxb2P0C1T1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hoxb2P0C1T1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb2P0C1T1 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb2P0C1T1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms