Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.61■■□□□ 1.37
Syn1O88935 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Syn1O88935 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.61■■□□□ 1.37
Syn1O88935 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Syn1O88935 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.61■■□□□ 1.37
Syn1O88935 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
Syn1O88935 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Syn1O88935 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Syn1O88935 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Syn1O88935 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Syn1O88935 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Syn1O88935 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Syn1O88935 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Syn1O88935 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Syn1O88935 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
Syn1O88935 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Syn1O88935 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Syn1O88935 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.54■■□□□ 1.36
Syn1O88935 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.54■■□□□ 1.36
Syn1O88935 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
Syn1O88935 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Syn1O88935 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Syn1O88935 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Syn1O88935 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Syn1O88935 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Syn1O88935 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Syn1O88935 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Syn1O88935 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Syn1O88935 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Syn1O88935 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Syn1O88935 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.5■■□□□ 1.35
Syn1O88935 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Syn1O88935 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Syn1O88935 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Syn1O88935 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.49■■□□□ 1.35
Syn1O88935 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Syn1O88935 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Syn1O88935 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.48■■□□□ 1.35
Syn1O88935 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Syn1O88935 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
Syn1O88935 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Syn1O88935 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
Syn1O88935 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Syn1O88935 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Syn1O88935 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Syn1O88935 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Syn1O88935 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC23.45■■□□□ 1.34
Syn1O88935 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Syn1O88935 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Syn1O88935 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Syn1O88935 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Syn1O88935 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC23.44■■□□□ 1.34
Syn1O88935 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Syn1O88935 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.44■■□□□ 1.34
Syn1O88935 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Syn1O88935 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Syn1O88935 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Syn1O88935 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Syn1O88935 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.43■■□□□ 1.34
Syn1O88935 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Syn1O88935 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Syn1O88935 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Syn1O88935 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Syn1O88935 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC23.42■■□□□ 1.34
Syn1O88935 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Syn1O88935 Amer2-203ENSMUST00000225247 2662 ntBASIC23.42■■□□□ 1.34
Syn1O88935 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
Syn1O88935 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Syn1O88935 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Syn1O88935 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Syn1O88935 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Syn1O88935 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.4■■□□□ 1.34
Syn1O88935 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Syn1O88935 Gm10232-201ENSMUST00000089221 720 ntBASIC23.4■■□□□ 1.34
Syn1O88935 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Syn1O88935 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Syn1O88935 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Syn1O88935 Gm13241-201ENSMUST00000094493 780 ntBASIC23.39■■□□□ 1.33
Syn1O88935 Gm43034-201ENSMUST00000198678 1364 ntBASIC23.39■■□□□ 1.33
Syn1O88935 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Syn1O88935 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Syn1O88935 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
Syn1O88935 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.38■■□□□ 1.33
Syn1O88935 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC23.38■■□□□ 1.33
Syn1O88935 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC23.38■■□□□ 1.33
Syn1O88935 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Syn1O88935 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Syn1O88935 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Syn1O88935 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Syn1O88935 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC23.37■■□□□ 1.33
Syn1O88935 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Syn1O88935 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.36■■□□□ 1.33
Syn1O88935 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Syn1O88935 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Syn1O88935 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 8.1 ms