Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.18■□□□□ 0.66
Col6a4A2AX52 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.18■□□□□ 0.66
Col6a4A2AX52 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Col6a4A2AX52 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.18■□□□□ 0.66
Col6a4A2AX52 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.18■□□□□ 0.66
Col6a4A2AX52 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Col6a4A2AX52 Gm45444-201ENSMUST00000211394 898 ntBASIC19.17■□□□□ 0.66
Col6a4A2AX52 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.17■□□□□ 0.66
Col6a4A2AX52 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a4A2AX52 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a4A2AX52 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a4A2AX52 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Col6a4A2AX52 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Col6a4A2AX52 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.15■□□□□ 0.66
Col6a4A2AX52 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a4A2AX52 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a4A2AX52 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a4A2AX52 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Col6a4A2AX52 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Col6a4A2AX52 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Col6a4A2AX52 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a4A2AX52 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Col6a4A2AX52 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Col6a4A2AX52 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.12■□□□□ 0.65
Col6a4A2AX52 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Col6a4A2AX52 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Col6a4A2AX52 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.11■□□□□ 0.65
Col6a4A2AX52 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Col6a4A2AX52 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a4A2AX52 Amer2-203ENSMUST00000225247 2662 ntBASIC19.1■□□□□ 0.65
Col6a4A2AX52 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Col6a4A2AX52 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Col6a4A2AX52 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.09■□□□□ 0.65
Col6a4A2AX52 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Col6a4A2AX52 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.08■□□□□ 0.64
Col6a4A2AX52 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col6a4A2AX52 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Col6a4A2AX52 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a4A2AX52 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.07■□□□□ 0.64
Col6a4A2AX52 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a4A2AX52 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.07■□□□□ 0.64
Col6a4A2AX52 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col6a4A2AX52 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col6a4A2AX52 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.06■□□□□ 0.64
Col6a4A2AX52 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Col6a4A2AX52 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col6a4A2AX52 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.04■□□□□ 0.64
Col6a4A2AX52 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.03■□□□□ 0.64
Col6a4A2AX52 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Gm10232-201ENSMUST00000089221 720 ntBASIC19.03■□□□□ 0.64
Col6a4A2AX52 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col6a4A2AX52 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a4A2AX52 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a4A2AX52 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.02■□□□□ 0.64
Col6a4A2AX52 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col6a4A2AX52 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a4A2AX52 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a4A2AX52 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col6a4A2AX52 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.01■□□□□ 0.63
Col6a4A2AX52 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Col6a4A2AX52 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col6a4A2AX52 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19■□□□□ 0.63
Col6a4A2AX52 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a4A2AX52 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19■□□□□ 0.63
Col6a4A2AX52 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Col6a4A2AX52 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col6a4A2AX52 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col6a4A2AX52 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a4A2AX52 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col6a4A2AX52 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col6a4A2AX52 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col6a4A2AX52 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.96■□□□□ 0.63
Col6a4A2AX52 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Col6a4A2AX52 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC18.95■□□□□ 0.62
Col6a4A2AX52 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col6a4A2AX52 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.94■□□□□ 0.62
Col6a4A2AX52 Gm6206-201ENSMUST00000133472 2199 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms