Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.3■□□□□ 0.68
Trbv23A0A0A6YWQ1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv23A0A0A6YWQ1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv23A0A0A6YWQ1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv23A0A0A6YWQ1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Trbv23A0A0A6YWQ1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.29■□□□□ 0.68
Trbv23A0A0A6YWQ1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Trbv23A0A0A6YWQ1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv23A0A0A6YWQ1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Trbv23A0A0A6YWQ1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv23A0A0A6YWQ1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.28■□□□□ 0.68
Trbv23A0A0A6YWQ1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv23A0A0A6YWQ1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv23A0A0A6YWQ1 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv23A0A0A6YWQ1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv23A0A0A6YWQ1 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv23A0A0A6YWQ1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv23A0A0A6YWQ1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Trbv23A0A0A6YWQ1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv23A0A0A6YWQ1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv23A0A0A6YWQ1 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.25■□□□□ 0.67
Trbv23A0A0A6YWQ1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.25■□□□□ 0.67
Trbv23A0A0A6YWQ1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv23A0A0A6YWQ1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Nkain2-201ENSMUST00000092602 558 ntBASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv23A0A0A6YWQ1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv23A0A0A6YWQ1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv23A0A0A6YWQ1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Trbv23A0A0A6YWQ1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trbv23A0A0A6YWQ1 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.22■□□□□ 0.67
Trbv23A0A0A6YWQ1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trbv23A0A0A6YWQ1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Trbv23A0A0A6YWQ1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv23A0A0A6YWQ1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm30023-201ENSMUST00000197970 889 ntBASIC19.2■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.2■□□□□ 0.66
Trbv23A0A0A6YWQ1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.2■□□□□ 0.66
Trbv23A0A0A6YWQ1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trbv23A0A0A6YWQ1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trbv23A0A0A6YWQ1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm6821-201ENSMUST00000107540 542 ntBASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trbv23A0A0A6YWQ1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.16■□□□□ 0.66
Trbv23A0A0A6YWQ1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trbv23A0A0A6YWQ1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Trbv23A0A0A6YWQ1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trbv23A0A0A6YWQ1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms