Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav8n-2A0A075B633 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trav8n-2A0A075B633 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.9■□□□□ 0.94
Trav8n-2A0A075B633 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Trav8n-2A0A075B633 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.9■□□□□ 0.94
Trav8n-2A0A075B633 Rps24-207ENSMUST00000224568 714 ntBASIC20.9■□□□□ 0.94
Trav8n-2A0A075B633 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trav8n-2A0A075B633 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav8n-2A0A075B633 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8n-2A0A075B633 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.88■□□□□ 0.93
Trav8n-2A0A075B633 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8n-2A0A075B633 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav8n-2A0A075B633 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8n-2A0A075B633 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.87■□□□□ 0.93
Trav8n-2A0A075B633 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8n-2A0A075B633 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav8n-2A0A075B633 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav8n-2A0A075B633 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav8n-2A0A075B633 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav8n-2A0A075B633 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Gm13238-201ENSMUST00000117655 780 ntBASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trav8n-2A0A075B633 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Trav8n-2A0A075B633 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav8n-2A0A075B633 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trav8n-2A0A075B633 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.84■□□□□ 0.93
Trav8n-2A0A075B633 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav8n-2A0A075B633 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Trav8n-2A0A075B633 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav8n-2A0A075B633 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trav8n-2A0A075B633 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav8n-2A0A075B633 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.8■□□□□ 0.92
Trav8n-2A0A075B633 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Trav8n-2A0A075B633 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav8n-2A0A075B633 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav8n-2A0A075B633 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav8n-2A0A075B633 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav8n-2A0A075B633 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.78■□□□□ 0.92
Trav8n-2A0A075B633 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.78■□□□□ 0.92
Trav8n-2A0A075B633 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Trav8n-2A0A075B633 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav8n-2A0A075B633 Amer2-203ENSMUST00000225247 2662 ntBASIC20.76■□□□□ 0.91
Trav8n-2A0A075B633 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav8n-2A0A075B633 Gm45102-201ENSMUST00000207427 857 ntBASIC20.76■□□□□ 0.91
Trav8n-2A0A075B633 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav8n-2A0A075B633 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav8n-2A0A075B633 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav8n-2A0A075B633 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.73■□□□□ 0.91
Trav8n-2A0A075B633 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav8n-2A0A075B633 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Trav8n-2A0A075B633 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8n-2A0A075B633 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.71■□□□□ 0.91
Trav8n-2A0A075B633 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.71■□□□□ 0.91
Trav8n-2A0A075B633 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav8n-2A0A075B633 Gm14117-201ENSMUST00000122417 843 ntBASIC20.7■□□□□ 0.9
Trav8n-2A0A075B633 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8n-2A0A075B633 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8n-2A0A075B633 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav8n-2A0A075B633 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trav8n-2A0A075B633 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trav8n-2A0A075B633 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms