Protein–RNA interactions for Protein: A0A075B5S6

Ighv3-1, Immunoglobulin heavy variable 3-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-1A0A075B5S6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.96■□□□□ 0.47
Ighv3-1A0A075B5S6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ighv3-1A0A075B5S6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-1A0A075B5S6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Ighv3-1A0A075B5S6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv3-1A0A075B5S6 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.95■□□□□ 0.46
Ighv3-1A0A075B5S6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv3-1A0A075B5S6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.93■□□□□ 0.46
Ighv3-1A0A075B5S6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv3-1A0A075B5S6 Terc-201ENSMUST00000082862 423 ntBASIC17.93■□□□□ 0.46
Ighv3-1A0A075B5S6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv3-1A0A075B5S6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ighv3-1A0A075B5S6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv3-1A0A075B5S6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv3-1A0A075B5S6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv3-1A0A075B5S6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv3-1A0A075B5S6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv3-1A0A075B5S6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ighv3-1A0A075B5S6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm10420-201ENSMUST00000121713 882 ntBASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ighv3-1A0A075B5S6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.88■□□□□ 0.45
Ighv3-1A0A075B5S6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-1A0A075B5S6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.87■□□□□ 0.45
Ighv3-1A0A075B5S6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Ighv3-1A0A075B5S6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Ighv3-1A0A075B5S6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Ighv3-1A0A075B5S6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.84■□□□□ 0.45
Ighv3-1A0A075B5S6 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-1A0A075B5S6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-1A0A075B5S6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Ighv3-1A0A075B5S6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Ighv3-1A0A075B5S6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-1A0A075B5S6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Ighv3-1A0A075B5S6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Ighv3-1A0A075B5S6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ighv3-1A0A075B5S6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.82■□□□□ 0.44
Ighv3-1A0A075B5S6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ighv3-1A0A075B5S6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ighv3-1A0A075B5S6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-1A0A075B5S6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-1A0A075B5S6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ighv3-1A0A075B5S6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms