Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn13Q9Z0S4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn13Q9Z0S4 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cldn13Q9Z0S4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn13Q9Z0S4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn13Q9Z0S4 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn13Q9Z0S4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn13Q9Z0S4 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cldn13Q9Z0S4 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn13Q9Z0S4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn13Q9Z0S4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Cldn13Q9Z0S4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Gm6311-201ENSMUST00000073790 878 ntBASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Gm4799-201ENSMUST00000095396 657 ntBASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn13Q9Z0S4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn13Q9Z0S4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn13Q9Z0S4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.13■□□□□ 0.81
Cldn13Q9Z0S4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Cldn13Q9Z0S4 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cldn13Q9Z0S4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cldn13Q9Z0S4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.11■□□□□ 0.81
Cldn13Q9Z0S4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn13Q9Z0S4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn13Q9Z0S4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cldn13Q9Z0S4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.1■□□□□ 0.81
Cldn13Q9Z0S4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cldn13Q9Z0S4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Cldn13Q9Z0S4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.09■□□□□ 0.81
Cldn13Q9Z0S4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cldn13Q9Z0S4 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cldn13Q9Z0S4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn13Q9Z0S4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cldn13Q9Z0S4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn13Q9Z0S4 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cldn13Q9Z0S4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Cldn13Q9Z0S4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn13Q9Z0S4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cldn13Q9Z0S4 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.06■□□□□ 0.8
Cldn13Q9Z0S4 Mir3960-201ENSMUST00000198213 73 ntBASIC20.06■□□□□ 0.8
Cldn13Q9Z0S4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cldn13Q9Z0S4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.05■□□□□ 0.8
Cldn13Q9Z0S4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.04■□□□□ 0.8
Cldn13Q9Z0S4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Gm11175-201ENSMUST00000116172 543 ntBASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Gm45364-201ENSMUST00000210883 159 ntBASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cldn13Q9Z0S4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Cldn13Q9Z0S4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn13Q9Z0S4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn13Q9Z0S4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cldn13Q9Z0S4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn13Q9Z0S4 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.01■□□□□ 0.79
Cldn13Q9Z0S4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.01■□□□□ 0.79
Cldn13Q9Z0S4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cldn13Q9Z0S4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn13Q9Z0S4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn13Q9Z0S4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cldn13Q9Z0S4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn13Q9Z0S4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cldn13Q9Z0S4 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.99■□□□□ 0.79
Cldn13Q9Z0S4 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.99■□□□□ 0.79
Cldn13Q9Z0S4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms