Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Clcn2Q9R0A1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.18■■□□□ 1.3
Clcn2Q9R0A1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Clcn2Q9R0A1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn2Q9R0A1 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.17■■□□□ 1.3
Clcn2Q9R0A1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.17■■□□□ 1.3
Clcn2Q9R0A1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn2Q9R0A1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Clcn2Q9R0A1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn2Q9R0A1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.16■■□□□ 1.3
Clcn2Q9R0A1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Clcn2Q9R0A1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Clcn2Q9R0A1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Clcn2Q9R0A1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn2Q9R0A1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn2Q9R0A1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Clcn2Q9R0A1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn2Q9R0A1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn2Q9R0A1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC23.14■■□□□ 1.29
Clcn2Q9R0A1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Clcn2Q9R0A1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Clcn2Q9R0A1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn2Q9R0A1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn2Q9R0A1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Clcn2Q9R0A1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.12■■□□□ 1.29
Clcn2Q9R0A1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Clcn2Q9R0A1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn2Q9R0A1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.1■■□□□ 1.29
Clcn2Q9R0A1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Clcn2Q9R0A1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.09■■□□□ 1.29
Clcn2Q9R0A1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Clcn2Q9R0A1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Clcn2Q9R0A1 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn2Q9R0A1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn2Q9R0A1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Clcn2Q9R0A1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Clcn2Q9R0A1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn2Q9R0A1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn2Q9R0A1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Clcn2Q9R0A1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.08■■□□□ 1.28
Clcn2Q9R0A1 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn2Q9R0A1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
Clcn2Q9R0A1 Gm11599-201ENSMUST00000118720 878 ntBASIC23.07■■□□□ 1.28
Clcn2Q9R0A1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Clcn2Q9R0A1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Clcn2Q9R0A1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn2Q9R0A1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.05■■□□□ 1.28
Clcn2Q9R0A1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Clcn2Q9R0A1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn2Q9R0A1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn2Q9R0A1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn2Q9R0A1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn2Q9R0A1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Clcn2Q9R0A1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Clcn2Q9R0A1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn2Q9R0A1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Clcn2Q9R0A1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Clcn2Q9R0A1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn2Q9R0A1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Clcn2Q9R0A1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Clcn2Q9R0A1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Clcn2Q9R0A1 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.01■■□□□ 1.27
Clcn2Q9R0A1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Clcn2Q9R0A1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Clcn2Q9R0A1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23■■□□□ 1.27
Clcn2Q9R0A1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC23■■□□□ 1.27
Clcn2Q9R0A1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clcn2Q9R0A1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23■■□□□ 1.27
Clcn2Q9R0A1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC23■■□□□ 1.27
Clcn2Q9R0A1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn2Q9R0A1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn2Q9R0A1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn2Q9R0A1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
Clcn2Q9R0A1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Clcn2Q9R0A1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn2Q9R0A1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn2Q9R0A1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Clcn2Q9R0A1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Clcn2Q9R0A1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn2Q9R0A1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn2Q9R0A1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn2Q9R0A1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Clcn2Q9R0A1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms