Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chaf1bQ9D0N7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chaf1bQ9D0N7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.27■■□□□ 1
Chaf1bQ9D0N7 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Chaf1bQ9D0N7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chaf1bQ9D0N7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
Chaf1bQ9D0N7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Chaf1bQ9D0N7 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chaf1bQ9D0N7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Chaf1bQ9D0N7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chaf1bQ9D0N7 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1bQ9D0N7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1bQ9D0N7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chaf1bQ9D0N7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.22■□□□□ 0.99
Chaf1bQ9D0N7 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chaf1bQ9D0N7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chaf1bQ9D0N7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Chaf1bQ9D0N7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Chaf1bQ9D0N7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1bQ9D0N7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1bQ9D0N7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chaf1bQ9D0N7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Chaf1bQ9D0N7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chaf1bQ9D0N7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1bQ9D0N7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1bQ9D0N7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1bQ9D0N7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1bQ9D0N7 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chaf1bQ9D0N7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Chaf1bQ9D0N7 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.14■□□□□ 0.98
Chaf1bQ9D0N7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chaf1bQ9D0N7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Chaf1bQ9D0N7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Chaf1bQ9D0N7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chaf1bQ9D0N7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1bQ9D0N7 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chaf1bQ9D0N7 Gm45855-201ENSMUST00000212546 880 ntBASIC21.1■□□□□ 0.97
Chaf1bQ9D0N7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms