Protein–RNA interactions for Protein: Q9CY16

Mrps28, 28S ribosomal protein S28, mitochondrial, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrps28Q9CY16 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mrps28Q9CY16 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Mrps28Q9CY16 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.44■□□□□ 0.86
Mrps28Q9CY16 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Mrps28Q9CY16 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Mrps28Q9CY16 Gm9812-201ENSMUST00000061934 968 ntBASIC20.42■□□□□ 0.86
Mrps28Q9CY16 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Mrps28Q9CY16 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.41■□□□□ 0.86
Mrps28Q9CY16 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mrps28Q9CY16 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mrps28Q9CY16 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.41■□□□□ 0.86
Mrps28Q9CY16 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Mrps28Q9CY16 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Mrps28Q9CY16 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Mrps28Q9CY16 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Mrps28Q9CY16 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Mrps28Q9CY16 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Mrps28Q9CY16 Gm45364-201ENSMUST00000210883 159 ntBASIC20.39■□□□□ 0.85
Mrps28Q9CY16 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.39■□□□□ 0.85
Mrps28Q9CY16 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.39■□□□□ 0.85
Mrps28Q9CY16 Gm6311-201ENSMUST00000073790 878 ntBASIC20.39■□□□□ 0.85
Mrps28Q9CY16 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Mrps28Q9CY16 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Mrps28Q9CY16 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Mrps28Q9CY16 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrps28Q9CY16 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrps28Q9CY16 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mrps28Q9CY16 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Mrps28Q9CY16 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mrps28Q9CY16 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mrps28Q9CY16 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.33■□□□□ 0.85
Mrps28Q9CY16 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mrps28Q9CY16 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mrps28Q9CY16 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrps28Q9CY16 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Mrps28Q9CY16 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrps28Q9CY16 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mrps28Q9CY16 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrps28Q9CY16 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Mrps28Q9CY16 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.3■□□□□ 0.84
Mrps28Q9CY16 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Mrps28Q9CY16 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mrps28Q9CY16 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mrps28Q9CY16 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrps28Q9CY16 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Mrps28Q9CY16 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mrps28Q9CY16 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Mrps28Q9CY16 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mrps28Q9CY16 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Mrps28Q9CY16 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mrps28Q9CY16 Terc-201ENSMUST00000082862 423 ntBASIC20.27■□□□□ 0.84
Mrps28Q9CY16 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.27■□□□□ 0.83
Mrps28Q9CY16 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrps28Q9CY16 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mrps28Q9CY16 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.26■□□□□ 0.83
Mrps28Q9CY16 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Mrps28Q9CY16 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.26■□□□□ 0.83
Mrps28Q9CY16 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Mrps28Q9CY16 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.25■□□□□ 0.83
Mrps28Q9CY16 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mrps28Q9CY16 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mrps28Q9CY16 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mrps28Q9CY16 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mrps28Q9CY16 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrps28Q9CY16 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mrps28Q9CY16 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms