Protein–RNA interactions for Protein: Q9CQC5

Cdc42ep3, Cdc42 effector protein 3, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep3Q9CQC5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdc42ep3Q9CQC5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cdc42ep3Q9CQC5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cdc42ep3Q9CQC5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cdc42ep3Q9CQC5 Terc-201ENSMUST00000082862 423 ntBASIC21.11■□□□□ 0.97
Cdc42ep3Q9CQC5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdc42ep3Q9CQC5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cdc42ep3Q9CQC5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdc42ep3Q9CQC5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.1■□□□□ 0.97
Cdc42ep3Q9CQC5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cdc42ep3Q9CQC5 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.09■□□□□ 0.97
Cdc42ep3Q9CQC5 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdc42ep3Q9CQC5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cdc42ep3Q9CQC5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cdc42ep3Q9CQC5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cdc42ep3Q9CQC5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cdc42ep3Q9CQC5 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cdc42ep3Q9CQC5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdc42ep3Q9CQC5 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cdc42ep3Q9CQC5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdc42ep3Q9CQC5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cdc42ep3Q9CQC5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cdc42ep3Q9CQC5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.03■□□□□ 0.96
Cdc42ep3Q9CQC5 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cdc42ep3Q9CQC5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cdc42ep3Q9CQC5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdc42ep3Q9CQC5 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cdc42ep3Q9CQC5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cdc42ep3Q9CQC5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cdc42ep3Q9CQC5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cdc42ep3Q9CQC5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21■□□□□ 0.95
Cdc42ep3Q9CQC5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cdc42ep3Q9CQC5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Gm44428-201ENSMUST00000204474 874 ntBASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cdc42ep3Q9CQC5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cdc42ep3Q9CQC5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.98■□□□□ 0.95
Cdc42ep3Q9CQC5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cdc42ep3Q9CQC5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdc42ep3Q9CQC5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cdc42ep3Q9CQC5 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.97■□□□□ 0.95
Cdc42ep3Q9CQC5 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdc42ep3Q9CQC5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdc42ep3Q9CQC5 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdc42ep3Q9CQC5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.96■□□□□ 0.95
Cdc42ep3Q9CQC5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cdc42ep3Q9CQC5 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cdc42ep3Q9CQC5 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdc42ep3Q9CQC5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdc42ep3Q9CQC5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdc42ep3Q9CQC5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Etf1-202ENSMUST00000180351 108 ntBASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdc42ep3Q9CQC5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms