Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Trim33Q99PP7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.34■■□□□ 1.17
Trim33Q99PP7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim33Q99PP7 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.33■■□□□ 1.16
Trim33Q99PP7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trim33Q99PP7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Gm45364-201ENSMUST00000210883 159 ntBASIC22.32■■□□□ 1.16
Trim33Q99PP7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Trim33Q99PP7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim33Q99PP7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.3■■□□□ 1.16
Trim33Q99PP7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trim33Q99PP7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim33Q99PP7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.29■■□□□ 1.16
Trim33Q99PP7 Gm6311-201ENSMUST00000073790 878 ntBASIC22.29■■□□□ 1.16
Trim33Q99PP7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim33Q99PP7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trim33Q99PP7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim33Q99PP7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim33Q99PP7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trim33Q99PP7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim33Q99PP7 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.28■■□□□ 1.16
Trim33Q99PP7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim33Q99PP7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim33Q99PP7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim33Q99PP7 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.27■■□□□ 1.16
Trim33Q99PP7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim33Q99PP7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Trim33Q99PP7 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Trim33Q99PP7 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.26■■□□□ 1.15
Trim33Q99PP7 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim33Q99PP7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Trim33Q99PP7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim33Q99PP7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.24■■□□□ 1.15
Trim33Q99PP7 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.24■■□□□ 1.15
Trim33Q99PP7 Gm9812-201ENSMUST00000061934 968 ntBASIC22.24■■□□□ 1.15
Trim33Q99PP7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim33Q99PP7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim33Q99PP7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Trim33Q99PP7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trim33Q99PP7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Trim33Q99PP7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim33Q99PP7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.22■■□□□ 1.15
Trim33Q99PP7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Trim33Q99PP7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trim33Q99PP7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim33Q99PP7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim33Q99PP7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trim33Q99PP7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim33Q99PP7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.21■■□□□ 1.15
Trim33Q99PP7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Trim33Q99PP7 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.2■■□□□ 1.15
Trim33Q99PP7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Trim33Q99PP7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trim33Q99PP7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim33Q99PP7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Trim33Q99PP7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trim33Q99PP7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim33Q99PP7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim33Q99PP7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
Trim33Q99PP7 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Trim33Q99PP7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim33Q99PP7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim33Q99PP7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim33Q99PP7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trim33Q99PP7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trim33Q99PP7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Trim33Q99PP7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trim33Q99PP7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim33Q99PP7 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim33Q99PP7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim33Q99PP7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trim33Q99PP7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trim33Q99PP7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.14■■□□□ 1.13
Trim33Q99PP7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim33Q99PP7 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Trim33Q99PP7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Trim33Q99PP7 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trim33Q99PP7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim33Q99PP7 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.13■■□□□ 1.13
Trim33Q99PP7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim33Q99PP7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trim33Q99PP7 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trim33Q99PP7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim33Q99PP7 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trim33Q99PP7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Trim33Q99PP7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms