Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb2Q91XX7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb2Q91XX7 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb2Q91XX7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb2Q91XX7 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb2Q91XX7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb2Q91XX7 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhgb2Q91XX7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb2Q91XX7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb2Q91XX7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb2Q91XX7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhgb2Q91XX7 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pcdhgb2Q91XX7 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb2Q91XX7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb2Q91XX7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb2Q91XX7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb2Q91XX7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb2Q91XX7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb2Q91XX7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb2Q91XX7 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb2Q91XX7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb2Q91XX7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb2Q91XX7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb2Q91XX7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb2Q91XX7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Pcdhgb2Q91XX7 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb2Q91XX7 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pcdhgb2Q91XX7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Pcdhgb2Q91XX7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb2Q91XX7 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb2Q91XX7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhgb2Q91XX7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhgb2Q91XX7 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhgb2Q91XX7 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhgb2Q91XX7 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhgb2Q91XX7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhgb2Q91XX7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhgb2Q91XX7 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhgb2Q91XX7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb2Q91XX7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhgb2Q91XX7 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms