Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC27.4■■□□□ 1.98
Slc44a4Q91VA1 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Slc44a4Q91VA1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Slc44a4Q91VA1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Slc44a4Q91VA1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Slc44a4Q91VA1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Slc44a4Q91VA1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Slc44a4Q91VA1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Slc44a4Q91VA1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.37■■□□□ 1.97
Slc44a4Q91VA1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Slc44a4Q91VA1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC27.37■■□□□ 1.97
Slc44a4Q91VA1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Slc44a4Q91VA1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
Slc44a4Q91VA1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Slc44a4Q91VA1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Slc44a4Q91VA1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC27.35■■□□□ 1.97
Slc44a4Q91VA1 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Slc44a4Q91VA1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC27.34■■□□□ 1.97
Slc44a4Q91VA1 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Slc44a4Q91VA1 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Gm5921-201ENSMUST00000075898 882 ntBASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Slc44a4Q91VA1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.96
Slc44a4Q91VA1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Slc44a4Q91VA1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
Slc44a4Q91VA1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
Slc44a4Q91VA1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
Slc44a4Q91VA1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Slc44a4Q91VA1 Gm44428-201ENSMUST00000204474 874 ntBASIC27.3■■□□□ 1.96
Slc44a4Q91VA1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC27.3■■□□□ 1.96
Slc44a4Q91VA1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Slc44a4Q91VA1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC27.29■■□□□ 1.96
Slc44a4Q91VA1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Slc44a4Q91VA1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Slc44a4Q91VA1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Slc44a4Q91VA1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Slc44a4Q91VA1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Slc44a4Q91VA1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Slc44a4Q91VA1 Gm5812-201ENSMUST00000061073 957 ntBASIC27.28■■□□□ 1.96
Slc44a4Q91VA1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Slc44a4Q91VA1 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Slc44a4Q91VA1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC27.26■■□□□ 1.95
Slc44a4Q91VA1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
Slc44a4Q91VA1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Slc44a4Q91VA1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.26■■□□□ 1.95
Slc44a4Q91VA1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
Slc44a4Q91VA1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
Slc44a4Q91VA1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Slc44a4Q91VA1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Slc44a4Q91VA1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
Slc44a4Q91VA1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Slc44a4Q91VA1 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
Slc44a4Q91VA1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Slc44a4Q91VA1 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Slc44a4Q91VA1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Slc44a4Q91VA1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Slc44a4Q91VA1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC27.2■■□□□ 1.94
Slc44a4Q91VA1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC27.2■■□□□ 1.94
Slc44a4Q91VA1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Slc44a4Q91VA1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
Slc44a4Q91VA1 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Slc44a4Q91VA1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Slc44a4Q91VA1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Slc44a4Q91VA1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC27.18■■□□□ 1.94
Slc44a4Q91VA1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Slc44a4Q91VA1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc44a4Q91VA1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Slc44a4Q91VA1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc44a4Q91VA1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Slc44a4Q91VA1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Slc44a4Q91VA1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Slc44a4Q91VA1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Slc44a4Q91VA1 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
Slc44a4Q91VA1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Slc44a4Q91VA1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Slc44a4Q91VA1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Slc44a4Q91VA1 Fezf2-202ENSMUST00000224023 1917 ntBASIC27.15■■□□□ 1.94
Slc44a4Q91VA1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
Slc44a4Q91VA1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.93
Slc44a4Q91VA1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Slc44a4Q91VA1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Slc44a4Q91VA1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
Slc44a4Q91VA1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
Slc44a4Q91VA1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Slc44a4Q91VA1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Slc44a4Q91VA1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Slc44a4Q91VA1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Slc44a4Q91VA1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
Slc44a4Q91VA1 Gm13238-201ENSMUST00000117655 780 ntBASIC27.09■■□□□ 1.93
Slc44a4Q91VA1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC27.08■■□□□ 1.93
Slc44a4Q91VA1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms