Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ubqln1Q8R317 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Mir3960-201ENSMUST00000198213 73 ntBASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.44■■□□□ 1.02
Ubqln1Q8R317 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln1Q8R317 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln1Q8R317 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.43■■□□□ 1.02
Ubqln1Q8R317 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.43■■□□□ 1.02
Ubqln1Q8R317 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln1Q8R317 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
Ubqln1Q8R317 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ubqln1Q8R317 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln1Q8R317 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln1Q8R317 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln1Q8R317 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln1Q8R317 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ubqln1Q8R317 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln1Q8R317 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln1Q8R317 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln1Q8R317 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln1Q8R317 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ubqln1Q8R317 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln1Q8R317 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln1Q8R317 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln1Q8R317 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ubqln1Q8R317 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ubqln1Q8R317 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.39■■□□□ 1.01
Ubqln1Q8R317 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubqln1Q8R317 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ubqln1Q8R317 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Ubqln1Q8R317 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.38■■□□□ 1.01
Ubqln1Q8R317 Gm9812-201ENSMUST00000061934 968 ntBASIC21.38■■□□□ 1.01
Ubqln1Q8R317 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.38■■□□□ 1.01
Ubqln1Q8R317 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.37■■□□□ 1.01
Ubqln1Q8R317 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ubqln1Q8R317 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln1Q8R317 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln1Q8R317 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ubqln1Q8R317 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln1Q8R317 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln1Q8R317 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln1Q8R317 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ubqln1Q8R317 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.33■■□□□ 1.01
Ubqln1Q8R317 Gm45364-201ENSMUST00000210883 159 ntBASIC21.33■■□□□ 1.01
Ubqln1Q8R317 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Ubqln1Q8R317 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubqln1Q8R317 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.33■■□□□ 1
Ubqln1Q8R317 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Ubqln1Q8R317 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ubqln1Q8R317 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ubqln1Q8R317 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ubqln1Q8R317 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.32■■□□□ 1
Ubqln1Q8R317 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Ubqln1Q8R317 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubqln1Q8R317 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.31■■□□□ 1
Ubqln1Q8R317 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubqln1Q8R317 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.31■■□□□ 1
Ubqln1Q8R317 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
Ubqln1Q8R317 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ubqln1Q8R317 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubqln1Q8R317 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ubqln1Q8R317 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ubqln1Q8R317 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ubqln1Q8R317 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ubqln1Q8R317 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubqln1Q8R317 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubqln1Q8R317 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubqln1Q8R317 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ubqln1Q8R317 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.28■■□□□ 1
Ubqln1Q8R317 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ubqln1Q8R317 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Ubqln1Q8R317 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.27■■□□□ 1
Ubqln1Q8R317 Gm6311-201ENSMUST00000073790 878 ntBASIC21.27■■□□□ 1
Ubqln1Q8R317 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ubqln1Q8R317 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Ubqln1Q8R317 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ubqln1Q8R317 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.26■□□□□ 0.99
Ubqln1Q8R317 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.26■□□□□ 0.99
Ubqln1Q8R317 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubqln1Q8R317 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ubqln1Q8R317 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.25■□□□□ 0.99
Ubqln1Q8R317 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ubqln1Q8R317 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ubqln1Q8R317 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms