Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Nckap1lQ8K1X4 Gm37136-201ENSMUST00000194368 194 ntBASIC21.95■■□□□ 1.1
Nckap1lQ8K1X4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Nckap1lQ8K1X4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Nckap1lQ8K1X4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nckap1lQ8K1X4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Nckap1lQ8K1X4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nckap1lQ8K1X4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Nckap1lQ8K1X4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Nckap1lQ8K1X4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nckap1lQ8K1X4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1lQ8K1X4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nckap1lQ8K1X4 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nckap1lQ8K1X4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nckap1lQ8K1X4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Nckap1lQ8K1X4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1lQ8K1X4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1lQ8K1X4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nckap1lQ8K1X4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nckap1lQ8K1X4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nckap1lQ8K1X4 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nckap1lQ8K1X4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1lQ8K1X4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1lQ8K1X4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1lQ8K1X4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Nckap1lQ8K1X4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nckap1lQ8K1X4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1lQ8K1X4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
Nckap1lQ8K1X4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Nckap1lQ8K1X4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1lQ8K1X4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1lQ8K1X4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nckap1lQ8K1X4 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1lQ8K1X4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1lQ8K1X4 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Nckap1lQ8K1X4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Nckap1lQ8K1X4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1lQ8K1X4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1lQ8K1X4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Nckap1lQ8K1X4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nckap1lQ8K1X4 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Gm7432-201ENSMUST00000210343 879 ntBASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.79■■□□□ 1.08
Nckap1lQ8K1X4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nckap1lQ8K1X4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Nckap1lQ8K1X4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nckap1lQ8K1X4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms