Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Trim52Q8CDV4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Trim52Q8CDV4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Trim52Q8CDV4 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Trim52Q8CDV4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
Trim52Q8CDV4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trim52Q8CDV4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Trim52Q8CDV4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.79■■■□□ 2.2
Trim52Q8CDV4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Trim52Q8CDV4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Trim52Q8CDV4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Trim52Q8CDV4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.77■■■□□ 2.2
Trim52Q8CDV4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Trim52Q8CDV4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Trim52Q8CDV4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim52Q8CDV4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
Trim52Q8CDV4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Trim52Q8CDV4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Trim52Q8CDV4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Trim52Q8CDV4 Gm10420-201ENSMUST00000121713 882 ntBASIC28.75■■■□□ 2.19
Trim52Q8CDV4 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.75■■■□□ 2.19
Trim52Q8CDV4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Trim52Q8CDV4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.74■■■□□ 2.19
Trim52Q8CDV4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Trim52Q8CDV4 Gm44428-201ENSMUST00000204474 874 ntBASIC28.73■■■□□ 2.19
Trim52Q8CDV4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC28.71■■■□□ 2.19
Trim52Q8CDV4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.71■■■□□ 2.19
Trim52Q8CDV4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Trim52Q8CDV4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC28.7■■■□□ 2.18
Trim52Q8CDV4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC28.7■■■□□ 2.18
Trim52Q8CDV4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Trim52Q8CDV4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.69■■■□□ 2.18
Trim52Q8CDV4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC28.69■■■□□ 2.18
Trim52Q8CDV4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Trim52Q8CDV4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Trim52Q8CDV4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Trim52Q8CDV4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.67■■■□□ 2.18
Trim52Q8CDV4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Trim52Q8CDV4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC28.67■■■□□ 2.18
Trim52Q8CDV4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Trim52Q8CDV4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
Trim52Q8CDV4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Trim52Q8CDV4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Trim52Q8CDV4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
Trim52Q8CDV4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
Trim52Q8CDV4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
Trim52Q8CDV4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
Trim52Q8CDV4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Trim52Q8CDV4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Trim52Q8CDV4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Trim52Q8CDV4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Trim52Q8CDV4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC28.6■■■□□ 2.17
Trim52Q8CDV4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.6■■■□□ 2.17
Trim52Q8CDV4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.6■■■□□ 2.17
Trim52Q8CDV4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
Trim52Q8CDV4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28.6■■■□□ 2.17
Trim52Q8CDV4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Trim52Q8CDV4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim52Q8CDV4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Trim52Q8CDV4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Trim52Q8CDV4 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC28.58■■■□□ 2.17
Trim52Q8CDV4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Trim52Q8CDV4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Trim52Q8CDV4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.58■■■□□ 2.17
Trim52Q8CDV4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.57■■■□□ 2.16
Trim52Q8CDV4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim52Q8CDV4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Trim52Q8CDV4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
Trim52Q8CDV4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim52Q8CDV4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Trim52Q8CDV4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
Trim52Q8CDV4 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trim52Q8CDV4 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC28.53■■■□□ 2.16
Trim52Q8CDV4 Gm5921-201ENSMUST00000075898 882 ntBASIC28.53■■■□□ 2.16
Trim52Q8CDV4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Trim52Q8CDV4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Trim52Q8CDV4 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim52Q8CDV4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim52Q8CDV4 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim52Q8CDV4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Trim52Q8CDV4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.49■■■□□ 2.15
Trim52Q8CDV4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trim52Q8CDV4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trim52Q8CDV4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Trim52Q8CDV4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Trim52Q8CDV4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Trim52Q8CDV4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC28.48■■■□□ 2.15
Trim52Q8CDV4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Trim52Q8CDV4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Trim52Q8CDV4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Trim52Q8CDV4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms