Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Rsph6aQ8CDR2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Rsph6aQ8CDR2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC30.16■■■□□ 2.42
Rsph6aQ8CDR2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
Rsph6aQ8CDR2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Rsph6aQ8CDR2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.14■■■□□ 2.42
Rsph6aQ8CDR2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC30.14■■■□□ 2.42
Rsph6aQ8CDR2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
Rsph6aQ8CDR2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Rsph6aQ8CDR2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rsph6aQ8CDR2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC30.13■■■□□ 2.41
Rsph6aQ8CDR2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.13■■■□□ 2.41
Rsph6aQ8CDR2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rsph6aQ8CDR2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Rsph6aQ8CDR2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Rsph6aQ8CDR2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rsph6aQ8CDR2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Rsph6aQ8CDR2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rsph6aQ8CDR2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Rsph6aQ8CDR2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.1■■■□□ 2.41
Rsph6aQ8CDR2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Rsph6aQ8CDR2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Rsph6aQ8CDR2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Rsph6aQ8CDR2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC30.08■■■□□ 2.41
Rsph6aQ8CDR2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
Rsph6aQ8CDR2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
Rsph6aQ8CDR2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rsph6aQ8CDR2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.06■■■□□ 2.4
Rsph6aQ8CDR2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Rsph6aQ8CDR2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rsph6aQ8CDR2 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC30.05■■■□□ 2.4
Rsph6aQ8CDR2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Rsph6aQ8CDR2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph6aQ8CDR2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph6aQ8CDR2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph6aQ8CDR2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph6aQ8CDR2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rsph6aQ8CDR2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rsph6aQ8CDR2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Rsph6aQ8CDR2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Rsph6aQ8CDR2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
Rsph6aQ8CDR2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Rsph6aQ8CDR2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Rsph6aQ8CDR2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC30.01■■■□□ 2.39
Rsph6aQ8CDR2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Rsph6aQ8CDR2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
Rsph6aQ8CDR2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Gm44428-201ENSMUST00000204474 874 ntBASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rsph6aQ8CDR2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.98■■■□□ 2.39
Rsph6aQ8CDR2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Rsph6aQ8CDR2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC29.98■■■□□ 2.39
Rsph6aQ8CDR2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Rsph6aQ8CDR2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Rsph6aQ8CDR2 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rsph6aQ8CDR2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Rsph6aQ8CDR2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC29.96■■■□□ 2.39
Rsph6aQ8CDR2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Rsph6aQ8CDR2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
Rsph6aQ8CDR2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Rsph6aQ8CDR2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
Rsph6aQ8CDR2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Rsph6aQ8CDR2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Rsph6aQ8CDR2 Gm10420-201ENSMUST00000121713 882 ntBASIC29.94■■■□□ 2.38
Rsph6aQ8CDR2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Rsph6aQ8CDR2 Gm5067-201ENSMUST00000170449 1009 ntBASIC29.92■■■□□ 2.38
Rsph6aQ8CDR2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rsph6aQ8CDR2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Rsph6aQ8CDR2 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rsph6aQ8CDR2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.9■■■□□ 2.38
Rsph6aQ8CDR2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rsph6aQ8CDR2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC29.9■■■□□ 2.38
Rsph6aQ8CDR2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Rsph6aQ8CDR2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Rsph6aQ8CDR2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rsph6aQ8CDR2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
Rsph6aQ8CDR2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rsph6aQ8CDR2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Rsph6aQ8CDR2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rsph6aQ8CDR2 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rsph6aQ8CDR2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
Rsph6aQ8CDR2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC29.86■■■□□ 2.37
Retrieved 100 of 76,532 protein–RNA pairs in 285 ms