Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf2Q8BZT2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.25■■□□□ 1.31
Sh3rf2Q8BZT2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.25■■□□□ 1.31
Sh3rf2Q8BZT2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3rf2Q8BZT2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3rf2Q8BZT2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Sh3rf2Q8BZT2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf2Q8BZT2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3rf2Q8BZT2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Sh3rf2Q8BZT2 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Sh3rf2Q8BZT2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf2Q8BZT2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf2Q8BZT2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf2Q8BZT2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3rf2Q8BZT2 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3rf2Q8BZT2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3rf2Q8BZT2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3rf2Q8BZT2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3rf2Q8BZT2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Sh3rf2Q8BZT2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3rf2Q8BZT2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3rf2Q8BZT2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3rf2Q8BZT2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf2Q8BZT2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3rf2Q8BZT2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.19■■□□□ 1.3
Sh3rf2Q8BZT2 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Sh3rf2Q8BZT2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3rf2Q8BZT2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Sh3rf2Q8BZT2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3rf2Q8BZT2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3rf2Q8BZT2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.18■■□□□ 1.3
Sh3rf2Q8BZT2 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.17■■□□□ 1.3
Sh3rf2Q8BZT2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3rf2Q8BZT2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3rf2Q8BZT2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf2Q8BZT2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Sh3rf2Q8BZT2 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf2Q8BZT2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Sh3rf2Q8BZT2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3rf2Q8BZT2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.15■■□□□ 1.3
Sh3rf2Q8BZT2 Gm44428-201ENSMUST00000204474 874 ntBASIC23.15■■□□□ 1.3
Sh3rf2Q8BZT2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3rf2Q8BZT2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3rf2Q8BZT2 Gm10420-201ENSMUST00000121713 882 ntBASIC23.14■■□□□ 1.29
Sh3rf2Q8BZT2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3rf2Q8BZT2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3rf2Q8BZT2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.13■■□□□ 1.29
Sh3rf2Q8BZT2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf2Q8BZT2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.12■■□□□ 1.29
Sh3rf2Q8BZT2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3rf2Q8BZT2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf2Q8BZT2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.11■■□□□ 1.29
Sh3rf2Q8BZT2 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3rf2Q8BZT2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.1■■□□□ 1.29
Sh3rf2Q8BZT2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3rf2Q8BZT2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3rf2Q8BZT2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Sh3rf2Q8BZT2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.08■■□□□ 1.29
Sh3rf2Q8BZT2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3rf2Q8BZT2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3rf2Q8BZT2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3rf2Q8BZT2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf2Q8BZT2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf2Q8BZT2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3rf2Q8BZT2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf2Q8BZT2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3rf2Q8BZT2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3rf2Q8BZT2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3rf2Q8BZT2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3rf2Q8BZT2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3rf2Q8BZT2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Sh3rf2Q8BZT2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf2Q8BZT2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3rf2Q8BZT2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Sh3rf2Q8BZT2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3rf2Q8BZT2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Sh3rf2Q8BZT2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.01■■□□□ 1.27
Sh3rf2Q8BZT2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms