Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
ShbQ6PD21 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Gm9959-201ENSMUST00000068277 390 ntBASIC25.69■■□□□ 1.7
ShbQ6PD21 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ShbQ6PD21 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.68■■□□□ 1.7
ShbQ6PD21 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.68■■□□□ 1.7
ShbQ6PD21 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ShbQ6PD21 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ShbQ6PD21 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
ShbQ6PD21 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ShbQ6PD21 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
ShbQ6PD21 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.64■■□□□ 1.69
ShbQ6PD21 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ShbQ6PD21 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShbQ6PD21 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.62■■□□□ 1.69
ShbQ6PD21 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShbQ6PD21 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ShbQ6PD21 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.61■■□□□ 1.69
ShbQ6PD21 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
ShbQ6PD21 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShbQ6PD21 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ShbQ6PD21 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.6■■□□□ 1.69
ShbQ6PD21 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ShbQ6PD21 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ShbQ6PD21 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.58■■□□□ 1.69
ShbQ6PD21 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
ShbQ6PD21 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ShbQ6PD21 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
ShbQ6PD21 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ShbQ6PD21 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ShbQ6PD21 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.56■■□□□ 1.68
ShbQ6PD21 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ShbQ6PD21 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShbQ6PD21 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.55■■□□□ 1.68
ShbQ6PD21 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ShbQ6PD21 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.54■■□□□ 1.68
ShbQ6PD21 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ShbQ6PD21 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ShbQ6PD21 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ShbQ6PD21 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ShbQ6PD21 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ShbQ6PD21 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.5■■□□□ 1.67
ShbQ6PD21 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ShbQ6PD21 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.49■■□□□ 1.67
ShbQ6PD21 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
ShbQ6PD21 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ShbQ6PD21 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
ShbQ6PD21 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ShbQ6PD21 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ShbQ6PD21 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
ShbQ6PD21 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.45■■□□□ 1.66
ShbQ6PD21 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.45■■□□□ 1.66
ShbQ6PD21 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ShbQ6PD21 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ShbQ6PD21 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ShbQ6PD21 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ShbQ6PD21 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ShbQ6PD21 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShbQ6PD21 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ShbQ6PD21 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 111.8 ms