Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Abcf1Q6P542 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Abcf1Q6P542 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Abcf1Q6P542 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Abcf1Q6P542 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Abcf1Q6P542 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.3■■□□□ 1.64
Abcf1Q6P542 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Abcf1Q6P542 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC25.3■■□□□ 1.64
Abcf1Q6P542 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
Abcf1Q6P542 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Abcf1Q6P542 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
Abcf1Q6P542 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Abcf1Q6P542 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.28■■□□□ 1.64
Abcf1Q6P542 Gm30023-201ENSMUST00000197970 889 ntBASIC25.28■■□□□ 1.64
Abcf1Q6P542 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Abcf1Q6P542 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Abcf1Q6P542 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Abcf1Q6P542 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Abcf1Q6P542 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Abcf1Q6P542 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Abcf1Q6P542 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Abcf1Q6P542 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.25■■□□□ 1.63
Abcf1Q6P542 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Abcf1Q6P542 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Abcf1Q6P542 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Abcf1Q6P542 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.23■■□□□ 1.63
Abcf1Q6P542 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Abcf1Q6P542 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC25.22■■□□□ 1.63
Abcf1Q6P542 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Abcf1Q6P542 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Abcf1Q6P542 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC25.22■■□□□ 1.63
Abcf1Q6P542 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
Abcf1Q6P542 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Abcf1Q6P542 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Abcf1Q6P542 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Abcf1Q6P542 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.2■■□□□ 1.63
Abcf1Q6P542 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Abcf1Q6P542 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Abcf1Q6P542 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Abcf1Q6P542 Gm7432-201ENSMUST00000210343 879 ntBASIC25.19■■□□□ 1.62
Abcf1Q6P542 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
Abcf1Q6P542 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Abcf1Q6P542 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Abcf1Q6P542 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
Abcf1Q6P542 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Abcf1Q6P542 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Abcf1Q6P542 H3f3aos-201ENSMUST00000097448 2905 ntBASIC25.16■■□□□ 1.62
Abcf1Q6P542 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Abcf1Q6P542 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Abcf1Q6P542 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Abcf1Q6P542 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Abcf1Q6P542 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Abcf1Q6P542 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC25.14■■□□□ 1.62
Abcf1Q6P542 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Abcf1Q6P542 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Abcf1Q6P542 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Abcf1Q6P542 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC25.13■■□□□ 1.61
Abcf1Q6P542 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.13■■□□□ 1.61
Abcf1Q6P542 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Abcf1Q6P542 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Abcf1Q6P542 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Abcf1Q6P542 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Abcf1Q6P542 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Abcf1Q6P542 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Abcf1Q6P542 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Abcf1Q6P542 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC25.11■■□□□ 1.61
Abcf1Q6P542 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Abcf1Q6P542 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcf1Q6P542 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcf1Q6P542 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcf1Q6P542 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcf1Q6P542 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Abcf1Q6P542 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms