Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sdf4Q61112 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23■■□□□ 1.27
Sdf4Q61112 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Sdf4Q61112 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Sdf4Q61112 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sdf4Q61112 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sdf4Q61112 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.99■■□□□ 1.27
Sdf4Q61112 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sdf4Q61112 Gm45364-201ENSMUST00000210883 159 ntBASIC22.99■■□□□ 1.27
Sdf4Q61112 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Sdf4Q61112 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Sdf4Q61112 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sdf4Q61112 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sdf4Q61112 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sdf4Q61112 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sdf4Q61112 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sdf4Q61112 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Sdf4Q61112 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.97■■□□□ 1.27
Sdf4Q61112 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sdf4Q61112 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.97■■□□□ 1.27
Sdf4Q61112 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Sdf4Q61112 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sdf4Q61112 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.96■■□□□ 1.27
Sdf4Q61112 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.96■■□□□ 1.27
Sdf4Q61112 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.96■■□□□ 1.27
Sdf4Q61112 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Sdf4Q61112 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sdf4Q61112 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sdf4Q61112 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.95■■□□□ 1.26
Sdf4Q61112 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.95■■□□□ 1.26
Sdf4Q61112 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sdf4Q61112 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sdf4Q61112 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Sdf4Q61112 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sdf4Q61112 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Sdf4Q61112 Gm6311-201ENSMUST00000073790 878 ntBASIC22.94■■□□□ 1.26
Sdf4Q61112 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC22.94■■□□□ 1.26
Sdf4Q61112 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sdf4Q61112 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sdf4Q61112 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Sdf4Q61112 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.93■■□□□ 1.26
Sdf4Q61112 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sdf4Q61112 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Sdf4Q61112 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Sdf4Q61112 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sdf4Q61112 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sdf4Q61112 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Sdf4Q61112 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.91■■□□□ 1.26
Sdf4Q61112 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.91■■□□□ 1.26
Sdf4Q61112 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Sdf4Q61112 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Sdf4Q61112 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Sdf4Q61112 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Sdf4Q61112 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.89■■□□□ 1.25
Sdf4Q61112 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Sdf4Q61112 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Sdf4Q61112 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sdf4Q61112 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Sdf4Q61112 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sdf4Q61112 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Sdf4Q61112 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sdf4Q61112 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sdf4Q61112 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Sdf4Q61112 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Sdf4Q61112 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sdf4Q61112 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Sdf4Q61112 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sdf4Q61112 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sdf4Q61112 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Sdf4Q61112 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Sdf4Q61112 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.85■■□□□ 1.25
Sdf4Q61112 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sdf4Q61112 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sdf4Q61112 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.85■■□□□ 1.25
Sdf4Q61112 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Sdf4Q61112 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sdf4Q61112 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sdf4Q61112 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Sdf4Q61112 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sdf4Q61112 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.84■■□□□ 1.25
Sdf4Q61112 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sdf4Q61112 Terc-201ENSMUST00000082862 423 ntBASIC22.83■■□□□ 1.25
Sdf4Q61112 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Sdf4Q61112 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sdf4Q61112 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sdf4Q61112 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.81■■□□□ 1.24
Sdf4Q61112 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sdf4Q61112 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.8■■□□□ 1.24
Sdf4Q61112 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.8■■□□□ 1.24
Sdf4Q61112 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sdf4Q61112 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sdf4Q61112 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sdf4Q61112 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Sdf4Q61112 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms