Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Fam196aQ3USH1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Fam196aQ3USH1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Fam196aQ3USH1 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.47■■□□□ 1.35
Fam196aQ3USH1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.47■■□□□ 1.35
Fam196aQ3USH1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Fam196aQ3USH1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Fam196aQ3USH1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Fam196aQ3USH1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Fam196aQ3USH1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
Fam196aQ3USH1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Serp2-204ENSMUST00000228055 705 ntBASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Fam196aQ3USH1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Fam196aQ3USH1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Fam196aQ3USH1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.43■■□□□ 1.34
Fam196aQ3USH1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Fam196aQ3USH1 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Fam196aQ3USH1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Fam196aQ3USH1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Fam196aQ3USH1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Fam196aQ3USH1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.42■■□□□ 1.34
Fam196aQ3USH1 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Fam196aQ3USH1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.41■■□□□ 1.34
Fam196aQ3USH1 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Fam196aQ3USH1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fam196aQ3USH1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.39■■□□□ 1.34
Fam196aQ3USH1 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.39■■□□□ 1.33
Fam196aQ3USH1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Fam196aQ3USH1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Fam196aQ3USH1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.37■■□□□ 1.33
Fam196aQ3USH1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Fam196aQ3USH1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Fam196aQ3USH1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam196aQ3USH1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Fam196aQ3USH1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam196aQ3USH1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Fam196aQ3USH1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC23.34■■□□□ 1.33
Fam196aQ3USH1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Fam196aQ3USH1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Fam196aQ3USH1 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Fam196aQ3USH1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Fam196aQ3USH1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Fam196aQ3USH1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam196aQ3USH1 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.3■■□□□ 1.32
Fam196aQ3USH1 Etf1-202ENSMUST00000180351 108 ntBASIC23.3■■□□□ 1.32
Fam196aQ3USH1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Fam196aQ3USH1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Fam196aQ3USH1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Fam196aQ3USH1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Fam196aQ3USH1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Fam196aQ3USH1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam196aQ3USH1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.27■■□□□ 1.32
Fam196aQ3USH1 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.27■■□□□ 1.32
Fam196aQ3USH1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.27■■□□□ 1.32
Fam196aQ3USH1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.27■■□□□ 1.32
Fam196aQ3USH1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Fam196aQ3USH1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam196aQ3USH1 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.26■■□□□ 1.31
Fam196aQ3USH1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam196aQ3USH1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Fam196aQ3USH1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam196aQ3USH1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Fam196aQ3USH1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Fam196aQ3USH1 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.24■■□□□ 1.31
Fam196aQ3USH1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Fam196aQ3USH1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.23■■□□□ 1.31
Fam196aQ3USH1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Fam196aQ3USH1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam196aQ3USH1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam196aQ3USH1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Fam196aQ3USH1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Fam196aQ3USH1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Fam196aQ3USH1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Fam196aQ3USH1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Fam196aQ3USH1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.2■■□□□ 1.3
Fam196aQ3USH1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Fam196aQ3USH1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Fam196aQ3USH1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms