Protein–RNA interactions for Protein: P86792

Ccl21b, C-C motif chemokine 21b, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21bP86792 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ccl21bP86792 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.49■□□□□ 0.71
Ccl21bP86792 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl21bP86792 Gm9959-201ENSMUST00000068277 390 ntBASIC19.49■□□□□ 0.71
Ccl21bP86792 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Ccl21bP86792 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC19.49■□□□□ 0.71
Ccl21bP86792 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccl21bP86792 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl21bP86792 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccl21bP86792 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccl21bP86792 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Ccl21bP86792 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl21bP86792 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccl21bP86792 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccl21bP86792 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccl21bP86792 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.46■□□□□ 0.71
Ccl21bP86792 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21bP86792 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21bP86792 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccl21bP86792 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21bP86792 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21bP86792 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21bP86792 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccl21bP86792 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21bP86792 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21bP86792 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccl21bP86792 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccl21bP86792 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ccl21bP86792 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21bP86792 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.43■□□□□ 0.7
Ccl21bP86792 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21bP86792 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Ccl21bP86792 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21bP86792 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ccl21bP86792 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccl21bP86792 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21bP86792 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21bP86792 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccl21bP86792 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.42■□□□□ 0.7
Ccl21bP86792 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccl21bP86792 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Ccl21bP86792 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccl21bP86792 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl21bP86792 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccl21bP86792 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccl21bP86792 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccl21bP86792 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21bP86792 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccl21bP86792 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21bP86792 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21bP86792 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ccl21bP86792 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21bP86792 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccl21bP86792 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccl21bP86792 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21bP86792 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21bP86792 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Ccl21bP86792 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccl21bP86792 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21bP86792 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21bP86792 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21bP86792 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccl21bP86792 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.38■□□□□ 0.69
Ccl21bP86792 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccl21bP86792 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl21bP86792 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.37■□□□□ 0.69
Ccl21bP86792 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccl21bP86792 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.36■□□□□ 0.69
Ccl21bP86792 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl21bP86792 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccl21bP86792 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21bP86792 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21bP86792 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21bP86792 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.35■□□□□ 0.69
Ccl21bP86792 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccl21bP86792 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.35■□□□□ 0.69
Ccl21bP86792 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl21bP86792 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccl21bP86792 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Ccl21bP86792 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl21bP86792 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccl21bP86792 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Ccl21bP86792 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21bP86792 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccl21bP86792 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21bP86792 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccl21bP86792 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccl21bP86792 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccl21bP86792 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl21bP86792 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccl21bP86792 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccl21bP86792 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccl21bP86792 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21bP86792 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21bP86792 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccl21bP86792 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21bP86792 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21bP86792 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21bP86792 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccl21bP86792 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms