Protein–RNA interactions for Protein: P56484

Ccr8, C-C chemokine receptor type 8, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr8P56484 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr8P56484 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccr8P56484 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccr8P56484 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr8P56484 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr8P56484 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr8P56484 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr8P56484 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.47■□□□□ 0.71
Ccr8P56484 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccr8P56484 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.46■□□□□ 0.71
Ccr8P56484 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccr8P56484 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr8P56484 Mir3960-201ENSMUST00000198213 73 ntBASIC19.45■□□□□ 0.7
Ccr8P56484 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccr8P56484 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccr8P56484 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ccr8P56484 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccr8P56484 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr8P56484 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr8P56484 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr8P56484 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.43■□□□□ 0.7
Ccr8P56484 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr8P56484 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ccr8P56484 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccr8P56484 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr8P56484 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccr8P56484 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccr8P56484 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccr8P56484 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccr8P56484 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccr8P56484 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccr8P56484 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccr8P56484 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccr8P56484 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccr8P56484 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccr8P56484 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccr8P56484 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ccr8P56484 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.39■□□□□ 0.69
Ccr8P56484 Gm9812-201ENSMUST00000061934 968 ntBASIC19.39■□□□□ 0.69
Ccr8P56484 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.39■□□□□ 0.69
Ccr8P56484 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccr8P56484 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccr8P56484 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccr8P56484 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ccr8P56484 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccr8P56484 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccr8P56484 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccr8P56484 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccr8P56484 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.35■□□□□ 0.69
Ccr8P56484 Gm45364-201ENSMUST00000210883 159 ntBASIC19.35■□□□□ 0.69
Ccr8P56484 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.35■□□□□ 0.69
Ccr8P56484 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Ccr8P56484 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ccr8P56484 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ccr8P56484 AC153911.1-201ENSMUST00000220378 758 ntBASIC19.34■□□□□ 0.69
Ccr8P56484 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ccr8P56484 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr8P56484 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccr8P56484 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr8P56484 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccr8P56484 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr8P56484 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr8P56484 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr8P56484 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.32■□□□□ 0.68
Ccr8P56484 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr8P56484 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.32■□□□□ 0.68
Ccr8P56484 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccr8P56484 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccr8P56484 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr8P56484 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccr8P56484 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr8P56484 Gm6311-201ENSMUST00000073790 878 ntBASIC19.31■□□□□ 0.68
Ccr8P56484 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr8P56484 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccr8P56484 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr8P56484 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr8P56484 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr8P56484 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.3■□□□□ 0.68
Ccr8P56484 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr8P56484 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccr8P56484 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr8P56484 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr8P56484 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccr8P56484 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.28■□□□□ 0.68
Ccr8P56484 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr8P56484 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr8P56484 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr8P56484 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccr8P56484 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms