Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd27P41272 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd27P41272 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.34■□□□□ 0.53
Cd27P41272 Gm6311-201ENSMUST00000073790 878 ntBASIC18.34■□□□□ 0.53
Cd27P41272 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd27P41272 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.33■□□□□ 0.53
Cd27P41272 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd27P41272 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.32■□□□□ 0.52
Cd27P41272 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd27P41272 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd27P41272 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd27P41272 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd27P41272 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
Cd27P41272 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd27P41272 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd27P41272 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd27P41272 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.29■□□□□ 0.52
Cd27P41272 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd27P41272 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd27P41272 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd27P41272 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd27P41272 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd27P41272 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.27■□□□□ 0.52
Cd27P41272 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd27P41272 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd27P41272 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Cd27P41272 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd27P41272 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd27P41272 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cd27P41272 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd27P41272 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cd27P41272 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd27P41272 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd27P41272 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cd27P41272 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cd27P41272 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.25■□□□□ 0.51
Cd27P41272 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Cd27P41272 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cd27P41272 Gm11175-201ENSMUST00000116172 543 ntBASIC18.24■□□□□ 0.51
Cd27P41272 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd27P41272 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd27P41272 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cd27P41272 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cd27P41272 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cd27P41272 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Cd27P41272 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cd27P41272 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.23■□□□□ 0.51
Cd27P41272 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cd27P41272 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd27P41272 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cd27P41272 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd27P41272 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd27P41272 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd27P41272 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.22■□□□□ 0.51
Cd27P41272 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Cd27P41272 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cd27P41272 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cd27P41272 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.22■□□□□ 0.51
Cd27P41272 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd27P41272 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd27P41272 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.21■□□□□ 0.51
Cd27P41272 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd27P41272 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cd27P41272 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.21■□□□□ 0.51
Cd27P41272 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Terc-201ENSMUST00000082862 423 ntBASIC18.2■□□□□ 0.5
Cd27P41272 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cd27P41272 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
Cd27P41272 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd27P41272 Scarna2-201ENSMUST00000157560 414 ntBASIC18.19■□□□□ 0.5
Cd27P41272 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd27P41272 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.19■□□□□ 0.5
Cd27P41272 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cd27P41272 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd27P41272 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd27P41272 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd27P41272 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cd27P41272 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cd27P41272 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Cd27P41272 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cd27P41272 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd27P41272 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd27P41272 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cd27P41272 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms