Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox6P40645 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Sox6P40645 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sox6P40645 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.14■□□□□ 0.98
Sox6P40645 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Sox6P40645 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox6P40645 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox6P40645 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sox6P40645 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox6P40645 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Sox6P40645 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.13■□□□□ 0.97
Sox6P40645 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.13■□□□□ 0.97
Sox6P40645 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox6P40645 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Sox6P40645 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox6P40645 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox6P40645 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox6P40645 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Sox6P40645 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
Sox6P40645 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox6P40645 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox6P40645 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox6P40645 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox6P40645 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Sox6P40645 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox6P40645 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox6P40645 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.1■□□□□ 0.97
Sox6P40645 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Sox6P40645 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox6P40645 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox6P40645 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox6P40645 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox6P40645 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox6P40645 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Sox6P40645 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox6P40645 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox6P40645 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox6P40645 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox6P40645 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox6P40645 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox6P40645 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox6P40645 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox6P40645 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox6P40645 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sox6P40645 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox6P40645 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox6P40645 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Sox6P40645 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sox6P40645 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox6P40645 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Sox6P40645 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Sox6P40645 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.04■□□□□ 0.96
Sox6P40645 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox6P40645 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sox6P40645 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox6P40645 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox6P40645 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Sox6P40645 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox6P40645 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox6P40645 Particl-201ENSMUST00000205370 1560 ntBASIC21.02■□□□□ 0.96
Sox6P40645 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox6P40645 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox6P40645 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.02■□□□□ 0.96
Sox6P40645 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sox6P40645 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox6P40645 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox6P40645 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox6P40645 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox6P40645 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox6P40645 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox6P40645 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.99■□□□□ 0.95
Sox6P40645 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Sox6P40645 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.99■□□□□ 0.95
Sox6P40645 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Sox6P40645 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sox6P40645 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.98■□□□□ 0.95
Sox6P40645 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox6P40645 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Sox6P40645 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Sox6P40645 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox6P40645 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sox6P40645 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sox6P40645 Gm7432-201ENSMUST00000210343 879 ntBASIC20.97■□□□□ 0.95
Sox6P40645 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox6P40645 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Sox6P40645 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sox6P40645 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox6P40645 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox6P40645 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Sox6P40645 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.95■□□□□ 0.94
Sox6P40645 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox6P40645 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Sox6P40645 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
Sox6P40645 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sox6P40645 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms