Protein–RNA interactions for Protein: P40356

PGD1, Mediator of RNA polymerase II transcription subunit 3, yeastyeast

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGD1P40356 RDR1YOR380W 1641 nt5.99□□□□□ -1.45
PGD1P40356 CAK1YFL029C 1107 nt5.98□□□□□ -1.45
PGD1P40356 RAP1YNL216W 2484 nt5.98□□□□□ -1.45
PGD1P40356 JHD1YER051W 1479 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)DtA(AGC)D 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)FtA(AGC)F 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)GtA(AGC)G 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)HtA(AGC)H 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)JtA(AGC)J 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)K1tA(AGC)K1 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)K2tA(AGC)K2 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)LtA(AGC)L 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)M1tA(AGC)M1 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)M2tA(AGC)M2 73 nt5.97□□□□□ -1.45
PGD1P40356 tA(AGC)PtA(AGC)P 73 nt5.97□□□□□ -1.45
PGD1P40356 PAU5YFL020C 369 nt5.97□□□□□ -1.45
PGD1P40356 BDS1YOL164W 1941 nt5.97□□□□□ -1.45
PGD1P40356 ERO1YML130C 1692 nt5.96□□□□□ -1.46
PGD1P40356 HGH1YGR187C 1185 nt5.96□□□□□ -1.46
PGD1P40356 ERP2YAL007C 648 nt5.96□□□□□ -1.46
PGD1P40356 CYC3YAL039C 810 nt5.96□□□□□ -1.46
PGD1P40356 PMU1YKL128C 888 nt5.96□□□□□ -1.46
PGD1P40356 AIM33YML087C 939 nt5.96□□□□□ -1.46
PGD1P40356 YJL144WYJL144W 315 nt5.95□□□□□ -1.46
PGD1P40356 PGC1YPL206C 966 nt5.95□□□□□ -1.46
PGD1P40356 FRE5YOR384W 2085 nt5.94□□□□□ -1.46
PGD1P40356 DLD1YDL174C 1764 nt5.94□□□□□ -1.46
PGD1P40356 GET2YER083C 858 nt5.94□□□□□ -1.46
PGD1P40356 YMR166CYMR166C 1107 nt5.94□□□□□ -1.46
PGD1P40356 IPL1YPL209C 1104 nt5.94□□□□□ -1.46
PGD1P40356 YBR284WYBR284W 2394 nt5.94□□□□□ -1.46
PGD1P40356 STP3YLR375W 1032 nt5.93□□□□□ -1.46
PGD1P40356 YML034C-AYML034C-A 399 nt5.93□□□□□ -1.46
PGD1P40356 YMR074CYMR074C 438 nt5.93□□□□□ -1.46
PGD1P40356 SLA2YNL243W 2907 nt5.92□□□□□ -1.46
PGD1P40356 STE3YKL178C 1413 nt5.92□□□□□ -1.46
PGD1P40356 CUE4YML101C 354 nt5.92□□□□□ -1.46
PGD1P40356 YOL099CYOL099C 492 nt5.92□□□□□ -1.46
PGD1P40356 FET4YMR319C 1659 nt5.91□□□□□ -1.46
PGD1P40356 PGI1YBR196C 1665 nt5.91□□□□□ -1.46
PGD1P40356 GEF1YJR040W 2340 nt5.91□□□□□ -1.46
PGD1P40356 snR82snR82 268 nt5.9□□□□□ -1.46
PGD1P40356 DYS1YHR068W 1164 nt5.9□□□□□ -1.46
PGD1P40356 INP54YOL065C 1155 nt5.9□□□□□ -1.46
PGD1P40356 RGD2YFL047W 2145 nt5.9□□□□□ -1.47
PGD1P40356 ACS1YAL054C 2142 nt5.9□□□□□ -1.47
PGD1P40356 PEX31YGR004W 1389 nt5.9□□□□□ -1.47
PGD1P40356 GYP8YFL027C 1494 nt5.9□□□□□ -1.47
PGD1P40356 YNL295WYNL295W 1575 nt5.89□□□□□ -1.47
PGD1P40356 CYC8YBR112C 2901 nt5.89□□□□□ -1.47
PGD1P40356 SUF3tG(CCC)D 72 nt5.89□□□□□ -1.47
PGD1P40356 CIS3YJL158C 684 nt5.89□□□□□ -1.47
PGD1P40356 POP1YNL221C 2628 nt5.89□□□□□ -1.47
PGD1P40356 MSG5YNL053W 1470 nt5.89□□□□□ -1.47
PGD1P40356 SKI2YLR398C 3864 nt5.88□□□□□ -1.47
PGD1P40356 ARG81YML099C 2643 nt5.88□□□□□ -1.47
PGD1P40356 YGR127WYGR127W 939 nt5.88□□□□□ -1.47
PGD1P40356 THR1YHR025W 1074 nt5.88□□□□□ -1.47
PGD1P40356 MGM101YJR144W 810 nt5.88□□□□□ -1.47
PGD1P40356 ADH5YBR145W 1056 nt5.88□□□□□ -1.47
PGD1P40356 TUF1YOR187W 1314 nt5.88□□□□□ -1.47
PGD1P40356 NMT1YLR195C 1368 nt5.88□□□□□ -1.47
PGD1P40356 EFT2YDR385W 2529 nt5.88□□□□□ -1.47
PGD1P40356 EFT1YOR133W 2529 nt5.88□□□□□ -1.47
PGD1P40356 SLX5YDL013W 1860 nt5.88□□□□□ -1.47
PGD1P40356 LAG2YOL025W 1983 nt5.87□□□□□ -1.47
PGD1P40356 PPM1YDR435C 987 nt5.87□□□□□ -1.47
PGD1P40356 RAD51YER095W 1203 nt5.87□□□□□ -1.47
PGD1P40356 RRT14YIL127C 621 nt5.87□□□□□ -1.47
PGD1P40356 RPL43AYPR043W 279 nt5.87□□□□□ -1.47
PGD1P40356 YBR232CYBR232C 360 nt5.87□□□□□ -1.47
PGD1P40356 YPL247CYPL247C 1572 nt5.87□□□□□ -1.47
PGD1P40356 IMA5YJL216C 1746 nt5.87□□□□□ -1.47
PGD1P40356 PAC2YER007W 1557 nt5.86□□□□□ -1.47
PGD1P40356 GCN3YKR026C 918 nt5.86□□□□□ -1.47
PGD1P40356 YPR204WYPR204W 3099 nt5.85□□□□□ -1.47
PGD1P40356 SES1YDR023W 1389 nt5.85□□□□□ -1.47
PGD1P40356 SER2YGR208W 930 nt5.85□□□□□ -1.47
PGD1P40356 YGR210CYGR210C 1236 nt5.85□□□□□ -1.47
PGD1P40356 ERG27YLR100W 1044 nt5.85□□□□□ -1.47
PGD1P40356 PEX13YLR191W 1161 nt5.85□□□□□ -1.47
PGD1P40356 LSP1YPL004C 1026 nt5.85□□□□□ -1.47
PGD1P40356 NAF1YNL124W 1479 nt5.84□□□□□ -1.47
PGD1P40356 TPO3YPR156C 1869 nt5.84□□□□□ -1.47
PGD1P40356 HIS1YER055C 894 nt5.84□□□□□ -1.47
PGD1P40356 PAU15YIR041W 375 nt5.84□□□□□ -1.47
PGD1P40356 YJR107WYJR107W 987 nt5.84□□□□□ -1.47
PGD1P40356 YPL108WYPL108W 507 nt5.84□□□□□ -1.47
PGD1P40356 RGD1YBR260C 2001 nt5.84□□□□□ -1.48
PGD1P40356 RSA4YCR072C 1548 nt5.84□□□□□ -1.48
PGD1P40356 TGA1tA(UGC)A 73 nt5.83□□□□□ -1.48
PGD1P40356 tA(UGC)EtA(UGC)E 73 nt5.83□□□□□ -1.48
PGD1P40356 tA(UGC)GtA(UGC)G 73 nt5.83□□□□□ -1.48
PGD1P40356 tA(UGC)LtA(UGC)L 73 nt5.83□□□□□ -1.48
PGD1P40356 tA(UGC)OtA(UGC)O 73 nt5.83□□□□□ -1.48
PGD1P40356 COX5AYNL052W 462 nt5.83□□□□□ -1.48
PGD1P40356 YPT10YBR264C 600 nt5.83□□□□□ -1.48
PGD1P40356 KTR5YNL029C 1569 nt5.82□□□□□ -1.48
PGD1P40356 YCR025CYCR025C 411 nt5.82□□□□□ -1.48
PGD1P40356 RRP43YCR035C 1185 nt5.82□□□□□ -1.48
Retrieved 100 of 7,029 protein–RNA pairs in 89.4 ms