Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.68■■□□□ 1.06
Cdh4P39038 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.68■■□□□ 1.06
Cdh4P39038 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh4P39038 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh4P39038 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Cdh4P39038 Scarna2-201ENSMUST00000157560 414 ntBASIC21.67■■□□□ 1.06
Cdh4P39038 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Cdh4P39038 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh4P39038 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.67■■□□□ 1.06
Cdh4P39038 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh4P39038 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh4P39038 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Cdh4P39038 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh4P39038 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh4P39038 Gm9806-201ENSMUST00000051080 552 ntBASIC21.65■■□□□ 1.06
Cdh4P39038 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Cdh4P39038 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh4P39038 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.06
Cdh4P39038 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh4P39038 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh4P39038 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh4P39038 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh4P39038 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh4P39038 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdh4P39038 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh4P39038 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh4P39038 Gm11175-201ENSMUST00000116172 543 ntBASIC21.63■■□□□ 1.05
Cdh4P39038 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh4P39038 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh4P39038 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh4P39038 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh4P39038 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh4P39038 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh4P39038 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh4P39038 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cdh4P39038 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh4P39038 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh4P39038 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh4P39038 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh4P39038 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh4P39038 Gm11687-201ENSMUST00000118911 886 ntBASIC21.61■■□□□ 1.05
Cdh4P39038 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh4P39038 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh4P39038 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh4P39038 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh4P39038 Gm16437-201ENSMUST00000025669 507 ntBASIC21.6■■□□□ 1.05
Cdh4P39038 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh4P39038 Terc-201ENSMUST00000082862 423 ntBASIC21.6■■□□□ 1.05
Cdh4P39038 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh4P39038 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.59■■□□□ 1.05
Cdh4P39038 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh4P39038 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh4P39038 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh4P39038 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cdh4P39038 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh4P39038 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh4P39038 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
Cdh4P39038 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh4P39038 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh4P39038 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.57■■□□□ 1.04
Cdh4P39038 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh4P39038 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh4P39038 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh4P39038 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
Cdh4P39038 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh4P39038 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh4P39038 Mir6538-201ENSMUST00000183713 110 ntBASIC21.56■■□□□ 1.04
Cdh4P39038 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.56■■□□□ 1.04
Cdh4P39038 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Cdh4P39038 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh4P39038 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Cdh4P39038 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cdh4P39038 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.54■■□□□ 1.04
Cdh4P39038 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cdh4P39038 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdh4P39038 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Cdh4P39038 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.53■■□□□ 1.04
Cdh4P39038 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh4P39038 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cdh4P39038 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh4P39038 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cdh4P39038 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh4P39038 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh4P39038 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cdh4P39038 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Cdh4P39038 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh4P39038 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh4P39038 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh4P39038 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.51■■□□□ 1.03
Cdh4P39038 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh4P39038 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cdh4P39038 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.5■■□□□ 1.03
Cdh4P39038 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms