Protein–RNA interactions for Protein: P30681

Hmgb2, High mobility group protein B2, mousemouse

Known RBP Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb2P30681 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Hmgb2P30681 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC29.2■■■□□ 2.26
Hmgb2P30681 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Hmgb2P30681 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Hmgb2P30681 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
Hmgb2P30681 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC29.19■■■□□ 2.26
Hmgb2P30681 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Hmgb2P30681 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC29.19■■■□□ 2.26
Hmgb2P30681 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Hmgb2P30681 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
Hmgb2P30681 AC117769.4-201ENSMUST00000225679 685 ntBASIC29.18■■■□□ 2.26
Hmgb2P30681 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Hmgb2P30681 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC29.17■■■□□ 2.26
Hmgb2P30681 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
Hmgb2P30681 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC29.15■■■□□ 2.26
Hmgb2P30681 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC29.15■■■□□ 2.26
Hmgb2P30681 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Hmgb2P30681 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Hmgb2P30681 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Hmgb2P30681 Gm13238-201ENSMUST00000117655 780 ntBASIC29.14■■■□□ 2.26
Hmgb2P30681 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgb2P30681 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgb2P30681 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgb2P30681 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Hmgb2P30681 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC29.12■■■□□ 2.25
Hmgb2P30681 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hmgb2P30681 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC29.11■■■□□ 2.25
Hmgb2P30681 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC29.11■■■□□ 2.25
Hmgb2P30681 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hmgb2P30681 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Hmgb2P30681 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Hmgb2P30681 Gm14117-201ENSMUST00000122417 843 ntBASIC29.1■■■□□ 2.25
Hmgb2P30681 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC29.1■■■□□ 2.25
Hmgb2P30681 Gm37847-201ENSMUST00000192163 1497 ntBASIC29.1■■■□□ 2.25
Hmgb2P30681 Gm31748-201ENSMUST00000194938 1497 ntBASIC29.1■■■□□ 2.25
Hmgb2P30681 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC29.09■■■□□ 2.25
Hmgb2P30681 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Hmgb2P30681 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Hmgb2P30681 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Hmgb2P30681 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Hmgb2P30681 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
Hmgb2P30681 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Hmgb2P30681 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Hmgb2P30681 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Hmgb2P30681 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.06■■■□□ 2.24
Hmgb2P30681 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Hmgb2P30681 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC29.06■■■□□ 2.24
Hmgb2P30681 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC29.06■■■□□ 2.24
Hmgb2P30681 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Hmgb2P30681 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Hmgb2P30681 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Hmgb2P30681 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Hmgb2P30681 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Hmgb2P30681 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Hmgb2P30681 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
Hmgb2P30681 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Hmgb2P30681 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC29.02■■■□□ 2.24
Hmgb2P30681 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
Hmgb2P30681 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC29.02■■■□□ 2.24
Hmgb2P30681 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC29.01■■■□□ 2.24
Hmgb2P30681 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.24
Hmgb2P30681 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC29.01■■■□□ 2.23
Hmgb2P30681 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC29.01■■■□□ 2.23
Hmgb2P30681 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Hmgb2P30681 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Hmgb2P30681 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC29■■■□□ 2.23
Hmgb2P30681 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Hmgb2P30681 Gm9959-201ENSMUST00000068277 390 ntBASIC28.99■■■□□ 2.23
Hmgb2P30681 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
Hmgb2P30681 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
Hmgb2P30681 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Hmgb2P30681 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Hmgb2P30681 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Hmgb2P30681 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Hmgb2P30681 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Hmgb2P30681 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Hmgb2P30681 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC28.95■■■□□ 2.22
Hmgb2P30681 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.22
Hmgb2P30681 Gm4419-202ENSMUST00000226239 1431 ntBASIC28.94■■■□□ 2.22
Hmgb2P30681 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Hmgb2P30681 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC28.94■■■□□ 2.22
Hmgb2P30681 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.94■■■□□ 2.22
Hmgb2P30681 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.93■■■□□ 2.22
Hmgb2P30681 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Hmgb2P30681 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.92■■■□□ 2.22
Hmgb2P30681 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Hmgb2P30681 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Hmgb2P30681 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC28.91■■■□□ 2.22
Hmgb2P30681 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Hmgb2P30681 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Hmgb2P30681 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Hmgb2P30681 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Hmgb2P30681 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Hmgb2P30681 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Hmgb2P30681 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Retrieved 100 of 76,532 protein–RNA pairs in 178.9 ms