Protein–RNA interactions for Protein: P12399

Ctla2a, Protein CTLA-2-alpha, mousemouse

Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla2aP12399 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.51■□□□□ 0.87
Ctla2aP12399 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.51■□□□□ 0.87
Ctla2aP12399 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ctla2aP12399 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ctla2aP12399 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ctla2aP12399 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ctla2aP12399 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctla2aP12399 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctla2aP12399 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctla2aP12399 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ctla2aP12399 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ctla2aP12399 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctla2aP12399 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctla2aP12399 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ctla2aP12399 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctla2aP12399 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctla2aP12399 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ctla2aP12399 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctla2aP12399 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ctla2aP12399 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctla2aP12399 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctla2aP12399 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ctla2aP12399 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctla2aP12399 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctla2aP12399 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctla2aP12399 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctla2aP12399 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.45■□□□□ 0.86
Ctla2aP12399 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctla2aP12399 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ctla2aP12399 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Ctla2aP12399 Particl-201ENSMUST00000205370 1560 ntBASIC20.44■□□□□ 0.86
Ctla2aP12399 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctla2aP12399 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctla2aP12399 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Ctla2aP12399 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ctla2aP12399 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctla2aP12399 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctla2aP12399 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctla2aP12399 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctla2aP12399 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ctla2aP12399 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctla2aP12399 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.42■□□□□ 0.86
Ctla2aP12399 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctla2aP12399 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctla2aP12399 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ctla2aP12399 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctla2aP12399 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.41■□□□□ 0.86
Ctla2aP12399 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctla2aP12399 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctla2aP12399 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctla2aP12399 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctla2aP12399 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctla2aP12399 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctla2aP12399 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctla2aP12399 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ctla2aP12399 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ctla2aP12399 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctla2aP12399 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.39■□□□□ 0.85
Ctla2aP12399 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctla2aP12399 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctla2aP12399 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctla2aP12399 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctla2aP12399 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Ctla2aP12399 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctla2aP12399 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctla2aP12399 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.37■□□□□ 0.85
Ctla2aP12399 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctla2aP12399 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.37■□□□□ 0.85
Ctla2aP12399 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctla2aP12399 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ctla2aP12399 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ctla2aP12399 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctla2aP12399 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ctla2aP12399 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctla2aP12399 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
Ctla2aP12399 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ctla2aP12399 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ctla2aP12399 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
Ctla2aP12399 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctla2aP12399 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ctla2aP12399 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ctla2aP12399 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctla2aP12399 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctla2aP12399 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ctla2aP12399 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.34■□□□□ 0.85
Ctla2aP12399 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ctla2aP12399 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.33■□□□□ 0.85
Ctla2aP12399 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ctla2aP12399 Gm24804-201ENSMUST00000174982 85 ntBASIC20.33■□□□□ 0.85
Ctla2aP12399 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.33■□□□□ 0.84
Ctla2aP12399 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ctla2aP12399 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctla2aP12399 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctla2aP12399 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ctla2aP12399 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms