Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
P06320 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
P06320 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
P06320 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06320 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
P06320 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06320 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC14.33□□□□□ -0.12
P06320 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.33□□□□□ -0.12
P06320 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06320 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06320 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
P06320 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06320 Gm26115-201ENSMUST00000175605 87 ntBASIC14.32□□□□□ -0.12
P06320 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06320 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
P06320 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
P06320 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
P06320 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
P06320 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC14.31□□□□□ -0.12
P06320 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P06320 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06320 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
P06320 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P06320 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.29□□□□□ -0.12
P06320 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06320 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06320 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
P06320 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P06320 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC14.28□□□□□ -0.12
P06320 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P06320 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
P06320 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P06320 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06320 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06320 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06320 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P06320 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
P06320 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
P06320 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
P06320 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC14.24□□□□□ -0.13
P06320 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
P06320 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.24□□□□□ -0.13
P06320 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
P06320 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Gm6277-202ENSMUST00000224036 2779 ntBASIC14.23□□□□□ -0.13
P06320 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P06320 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
P06320 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06320 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P06320 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P06320 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
P06320 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P06320 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P06320 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P06320 Gm8109-201ENSMUST00000194076 746 ntBASIC14.21□□□□□ -0.13
P06320 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
P06320 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
P06320 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC14.2□□□□□ -0.14
P06320 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06320 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
P06320 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06320 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
P06320 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC14.2□□□□□ -0.14
P06320 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms