Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cd74P04441 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.86■□□□□ 0.61
Cd74P04441 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.86■□□□□ 0.61
Cd74P04441 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cd74P04441 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd74P04441 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Cd74P04441 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.85■□□□□ 0.61
Cd74P04441 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cd74P04441 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Cd74P04441 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.84■□□□□ 0.61
Cd74P04441 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cd74P04441 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cd74P04441 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd74P04441 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Cd74P04441 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cd74P04441 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd74P04441 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd74P04441 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cd74P04441 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cd74P04441 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd74P04441 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cd74P04441 Gm4799-201ENSMUST00000095396 657 ntBASIC18.81■□□□□ 0.6
Cd74P04441 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cd74P04441 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd74P04441 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd74P04441 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd74P04441 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.8■□□□□ 0.6
Cd74P04441 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cd74P04441 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cd74P04441 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd74P04441 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cd74P04441 Gm11175-201ENSMUST00000116172 543 ntBASIC18.79■□□□□ 0.6
Cd74P04441 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Cd74P04441 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Cd74P04441 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd74P04441 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.78■□□□□ 0.6
Cd74P04441 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.78■□□□□ 0.6
Cd74P04441 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cd74P04441 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd74P04441 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd74P04441 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cd74P04441 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd74P04441 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd74P04441 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cd74P04441 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.77■□□□□ 0.6
Cd74P04441 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cd74P04441 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cd74P04441 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.77■□□□□ 0.6
Cd74P04441 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cd74P04441 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cd74P04441 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cd74P04441 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.76■□□□□ 0.59
Cd74P04441 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Cd74P04441 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cd74P04441 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd74P04441 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd74P04441 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cd74P04441 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cd74P04441 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.74■□□□□ 0.59
Cd74P04441 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cd74P04441 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.74■□□□□ 0.59
Cd74P04441 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Cd74P04441 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.73■□□□□ 0.59
Cd74P04441 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Cd74P04441 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
Cd74P04441 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cd74P04441 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cd74P04441 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cd74P04441 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cd74P04441 Gm37136-201ENSMUST00000194368 194 ntBASIC18.72■□□□□ 0.59
Cd74P04441 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cd74P04441 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cd74P04441 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd74P04441 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Cd74P04441 Mir3960-201ENSMUST00000198213 73 ntBASIC18.71■□□□□ 0.59
Cd74P04441 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cd74P04441 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms