Protein–RNA interactions for Protein: P00397

Mtco1, Cytochrome c oxidase subunit 1, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mtco1P00397 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.18■■□□□ 1.62
Mtco1P00397 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Mtco1P00397 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Mtco1P00397 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.17■■□□□ 1.62
Mtco1P00397 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Mtco1P00397 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC25.17■■□□□ 1.62
Mtco1P00397 Gm5067-201ENSMUST00000170449 1009 ntBASIC25.15■■□□□ 1.62
Mtco1P00397 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC25.15■■□□□ 1.62
Mtco1P00397 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Mtco1P00397 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.14■■□□□ 1.62
Mtco1P00397 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Mtco1P00397 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Mtco1P00397 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Mtco1P00397 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Mtco1P00397 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Mtco1P00397 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Mtco1P00397 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Mtco1P00397 Gm10420-201ENSMUST00000121713 882 ntBASIC25.1■■□□□ 1.61
Mtco1P00397 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.09■■□□□ 1.61
Mtco1P00397 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.08■■□□□ 1.61
Mtco1P00397 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Mtco1P00397 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.08■■□□□ 1.61
Mtco1P00397 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Mtco1P00397 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.07■■□□□ 1.6
Mtco1P00397 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Mtco1P00397 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Mtco1P00397 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Mtco1P00397 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
Mtco1P00397 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Mtco1P00397 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Mtco1P00397 Gm44428-201ENSMUST00000204474 874 ntBASIC25.03■■□□□ 1.6
Mtco1P00397 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Mtco1P00397 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Mtco1P00397 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Mtco1P00397 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25■■□□□ 1.59
Mtco1P00397 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25■■□□□ 1.59
Mtco1P00397 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Mtco1P00397 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC24.99■■□□□ 1.59
Mtco1P00397 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
Mtco1P00397 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.98■■□□□ 1.59
Mtco1P00397 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Mtco1P00397 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.98■■□□□ 1.59
Mtco1P00397 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Mtco1P00397 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.98■■□□□ 1.59
Mtco1P00397 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Mtco1P00397 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Mtco1P00397 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Mtco1P00397 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Mtco1P00397 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
Mtco1P00397 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Mtco1P00397 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.94■■□□□ 1.58
Mtco1P00397 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
Mtco1P00397 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Mtco1P00397 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Mtco1P00397 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
Mtco1P00397 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Mtco1P00397 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.92■■□□□ 1.58
Mtco1P00397 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24.91■■□□□ 1.58
Mtco1P00397 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Mtco1P00397 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Mtco1P00397 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Mtco1P00397 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.9■■□□□ 1.58
Mtco1P00397 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Mtco1P00397 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Mtco1P00397 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.89■■□□□ 1.58
Mtco1P00397 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Mtco1P00397 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Mtco1P00397 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms