Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Slc6a20bO88575 Gm43566-201ENSMUST00000196851 808 ntBASIC25.47■■□□□ 1.67
Slc6a20bO88575 Gm44428-201ENSMUST00000204474 874 ntBASIC25.47■■□□□ 1.67
Slc6a20bO88575 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.47■■□□□ 1.67
Slc6a20bO88575 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Slc6a20bO88575 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a20bO88575 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a20bO88575 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC25.46■■□□□ 1.67
Slc6a20bO88575 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC25.45■■□□□ 1.66
Slc6a20bO88575 Gm14117-201ENSMUST00000122417 843 ntBASIC25.45■■□□□ 1.66
Slc6a20bO88575 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Slc6a20bO88575 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Slc6a20bO88575 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Slc6a20bO88575 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a20bO88575 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Slc6a20bO88575 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.44■■□□□ 1.66
Slc6a20bO88575 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC25.44■■□□□ 1.66
Slc6a20bO88575 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.44■■□□□ 1.66
Slc6a20bO88575 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.44■■□□□ 1.66
Slc6a20bO88575 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Slc6a20bO88575 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Slc6a20bO88575 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.42■■□□□ 1.66
Slc6a20bO88575 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC25.42■■□□□ 1.66
Slc6a20bO88575 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
Slc6a20bO88575 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Slc6a20bO88575 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a20bO88575 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a20bO88575 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Slc6a20bO88575 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Slc6a20bO88575 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
Slc6a20bO88575 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC25.39■■□□□ 1.66
Slc6a20bO88575 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
Slc6a20bO88575 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Slc6a20bO88575 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a20bO88575 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a20bO88575 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a20bO88575 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Slc6a20bO88575 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC25.36■■□□□ 1.65
Slc6a20bO88575 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Slc6a20bO88575 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Slc6a20bO88575 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc6a20bO88575 Gm45444-201ENSMUST00000211394 898 ntBASIC25.35■■□□□ 1.65
Slc6a20bO88575 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Slc6a20bO88575 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Slc6a20bO88575 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a20bO88575 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a20bO88575 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Slc6a20bO88575 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Slc6a20bO88575 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.34■■□□□ 1.65
Slc6a20bO88575 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC25.33■■□□□ 1.65
Slc6a20bO88575 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slc6a20bO88575 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Slc6a20bO88575 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Slc6a20bO88575 Gm9959-201ENSMUST00000068277 390 ntBASIC25.32■■□□□ 1.64
Slc6a20bO88575 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Slc6a20bO88575 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a20bO88575 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Slc6a20bO88575 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.31■■□□□ 1.64
Slc6a20bO88575 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Slc6a20bO88575 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.3■■□□□ 1.64
Slc6a20bO88575 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.29■■□□□ 1.64
Slc6a20bO88575 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a20bO88575 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.29■■□□□ 1.64
Slc6a20bO88575 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a20bO88575 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a20bO88575 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Slc6a20bO88575 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a20bO88575 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Slc6a20bO88575 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Slc6a20bO88575 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Slc6a20bO88575 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Slc6a20bO88575 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.26■■□□□ 1.63
Slc6a20bO88575 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.26■■□□□ 1.63
Slc6a20bO88575 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Slc6a20bO88575 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
Slc6a20bO88575 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.25■■□□□ 1.63
Slc6a20bO88575 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.25■■□□□ 1.63
Slc6a20bO88575 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Slc6a20bO88575 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Slc6a20bO88575 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Slc6a20bO88575 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a20bO88575 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a20bO88575 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Slc6a20bO88575 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.22■■□□□ 1.63
Slc6a20bO88575 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Slc6a20bO88575 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.22■■□□□ 1.63
Slc6a20bO88575 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
Slc6a20bO88575 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.21■■□□□ 1.63
Slc6a20bO88575 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.21■■□□□ 1.63
Slc6a20bO88575 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.21■■□□□ 1.63
Slc6a20bO88575 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Slc6a20bO88575 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
Slc6a20bO88575 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Slc6a20bO88575 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Slc6a20bO88575 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.2■■□□□ 1.62
Slc6a20bO88575 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Slc6a20bO88575 Zxda-201ENSMUST00000117281 2621 ntBASIC25.19■■□□□ 1.62
Slc6a20bO88575 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.19■■□□□ 1.62
Slc6a20bO88575 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Slc6a20bO88575 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms