Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ttc3O88196 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.39■■□□□ 1.49
Ttc3O88196 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Ttc3O88196 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.38■■□□□ 1.49
Ttc3O88196 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc3O88196 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc3O88196 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.37■■□□□ 1.49
Ttc3O88196 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Ttc3O88196 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.36■■□□□ 1.49
Ttc3O88196 Gm10420-201ENSMUST00000121713 882 ntBASIC24.36■■□□□ 1.49
Ttc3O88196 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc3O88196 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc3O88196 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc3O88196 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc3O88196 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.34■■□□□ 1.49
Ttc3O88196 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.34■■□□□ 1.49
Ttc3O88196 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Ttc3O88196 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ttc3O88196 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Ttc3O88196 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Ttc3O88196 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ttc3O88196 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc3O88196 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc3O88196 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc3O88196 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc3O88196 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.28■■□□□ 1.48
Ttc3O88196 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc3O88196 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.26■■□□□ 1.47
Ttc3O88196 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc3O88196 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ttc3O88196 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ttc3O88196 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ttc3O88196 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.23■■□□□ 1.47
Ttc3O88196 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.23■■□□□ 1.47
Ttc3O88196 Gm44428-201ENSMUST00000204474 874 ntBASIC24.23■■□□□ 1.47
Ttc3O88196 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.23■■□□□ 1.47
Ttc3O88196 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Ttc3O88196 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ttc3O88196 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Ttc3O88196 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ttc3O88196 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.2■■□□□ 1.46
Ttc3O88196 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ttc3O88196 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.19■■□□□ 1.46
Ttc3O88196 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Ttc3O88196 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Ttc3O88196 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ttc3O88196 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ttc3O88196 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.18■■□□□ 1.46
Ttc3O88196 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ttc3O88196 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ttc3O88196 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ttc3O88196 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.17■■□□□ 1.46
Ttc3O88196 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.16■■□□□ 1.46
Ttc3O88196 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Ttc3O88196 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ttc3O88196 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms