Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SgceO70258 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SgceO70258 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgceO70258 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.14■□□□□ 0.81
SgceO70258 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SgceO70258 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SgceO70258 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.14■□□□□ 0.81
SgceO70258 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SgceO70258 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SgceO70258 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SgceO70258 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SgceO70258 Gm11599-201ENSMUST00000118720 878 ntBASIC20.12■□□□□ 0.81
SgceO70258 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgceO70258 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SgceO70258 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgceO70258 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SgceO70258 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgceO70258 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgceO70258 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgceO70258 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SgceO70258 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SgceO70258 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SgceO70258 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SgceO70258 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SgceO70258 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgceO70258 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SgceO70258 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SgceO70258 Gm4799-201ENSMUST00000095396 657 ntBASIC20.08■□□□□ 0.81
SgceO70258 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SgceO70258 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SgceO70258 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SgceO70258 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.07■□□□□ 0.8
SgceO70258 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SgceO70258 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SgceO70258 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SgceO70258 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
SgceO70258 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.06■□□□□ 0.8
SgceO70258 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
SgceO70258 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SgceO70258 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SgceO70258 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SgceO70258 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.05■□□□□ 0.8
SgceO70258 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SgceO70258 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.04■□□□□ 0.8
SgceO70258 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SgceO70258 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgceO70258 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.04■□□□□ 0.8
SgceO70258 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.04■□□□□ 0.8
SgceO70258 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SgceO70258 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SgceO70258 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.03■□□□□ 0.8
SgceO70258 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SgceO70258 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SgceO70258 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SgceO70258 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SgceO70258 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SgceO70258 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
SgceO70258 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.01■□□□□ 0.79
SgceO70258 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SgceO70258 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SgceO70258 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20■□□□□ 0.79
SgceO70258 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SgceO70258 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20■□□□□ 0.79
SgceO70258 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20■□□□□ 0.79
SgceO70258 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20■□□□□ 0.79
SgceO70258 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
SgceO70258 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SgceO70258 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SgceO70258 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SgceO70258 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgceO70258 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SgceO70258 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgceO70258 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SgceO70258 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SgceO70258 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgceO70258 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgceO70258 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SgceO70258 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SgceO70258 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgceO70258 Mir3960-201ENSMUST00000198213 73 ntBASIC19.96■□□□□ 0.79
SgceO70258 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SgceO70258 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgceO70258 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.95■□□□□ 0.78
SgceO70258 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgceO70258 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SgceO70258 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.95■□□□□ 0.78
SgceO70258 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SgceO70258 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms