Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 ORT1YOR130C 879 nt10.68□□□□□ -0.7
TY1B-HO13535 LIP5YOR196C 1245 nt10.67□□□□□ -0.7
TY1B-HO13535 ERG24YNL280C 1317 nt10.67□□□□□ -0.7
TY1B-HO13535 EMP65YER140W 1671 nt10.66□□□□□ -0.7
TY1B-HO13535 PDC5YLR134W 1692 nt10.66□□□□□ -0.7
TY1B-HO13535 BEM1YBR200W 1656 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)BtD(GUC)B 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)DtD(GUC)D 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)G1tD(GUC)G1 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)G2tD(GUC)G2 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)I1tD(GUC)I1 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)I2tD(GUC)I2 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)J1tD(GUC)J1 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)J2tD(GUC)J2 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)J3tD(GUC)J3 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)J4tD(GUC)J4 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)KtD(GUC)K 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)L1tD(GUC)L1 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)L2tD(GUC)L2 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)MtD(GUC)M 72 nt10.66□□□□□ -0.7
TY1B-HO13535 tD(GUC)OtD(GUC)O 72 nt10.66□□□□□ -0.7
TY1B-HO13535 FMO1YHR176W 1299 nt10.66□□□□□ -0.7
TY1B-HO13535 YOL099CYOL099C 492 nt10.66□□□□□ -0.7
TY1B-HO13535 SNA3YJL151C 402 nt10.65□□□□□ -0.7
TY1B-HO13535 snR4snR4 186 nt10.65□□□□□ -0.71
TY1B-HO13535 GPA2YER020W 1350 nt10.64□□□□□ -0.71
TY1B-HO13535 YNL097W-AYNL097W-A 156 nt10.64□□□□□ -0.71
TY1B-HO13535 ZWF1YNL241C 1518 nt10.63□□□□□ -0.71
TY1B-HO13535 PGI1YBR196C 1665 nt10.63□□□□□ -0.71
TY1B-HO13535 AFG3YER017C 2286 nt10.63□□□□□ -0.71
TY1B-HO13535 HNM1YGL077C 1692 nt10.62□□□□□ -0.71
TY1B-HO13535 NBA1YOL070C 1506 nt10.62□□□□□ -0.71
TY1B-HO13535 HMG2YLR450W 3138 nt10.6□□□□□ -0.71
TY1B-HO13535 LYS21YDL131W 1323 nt10.6□□□□□ -0.71
TY1B-HO13535 VMA3YEL027W 483 nt10.6□□□□□ -0.71
TY1B-HO13535 MIM1YOL026C 342 nt10.6□□□□□ -0.71
TY1B-HO13535 HED1YDR014W-A 489 nt10.6□□□□□ -0.71
TY1B-HO13535 YGL102CYGL102C 429 nt10.6□□□□□ -0.71
TY1B-HO13535 ERR1YOR393W 1314 nt10.59□□□□□ -0.71
TY1B-HO13535 ERR2YPL281C 1314 nt10.59□□□□□ -0.71
TY1B-HO13535 SMX3YPR182W 261 nt10.59□□□□□ -0.71
TY1B-HO13535 ICP55YER078C 1536 nt10.59□□□□□ -0.71
TY1B-HO13535 HPT1YDR399W 666 nt10.58□□□□□ -0.72
TY1B-HO13535 MOG1YJR074W 657 nt10.57□□□□□ -0.72
TY1B-HO13535 PFS2YNL317W 1398 nt10.57□□□□□ -0.72
TY1B-HO13535 CUE4YML101C 354 nt10.57□□□□□ -0.72
TY1B-HO13535 REC107YJR021C 945 nt10.56□□□□□ -0.72
TY1B-HO13535 YKL018C-AYKL018C-A 300 nt10.55□□□□□ -0.72
TY1B-HO13535 ERG27YLR100W 1044 nt10.55□□□□□ -0.72
TY1B-HO13535 RAD59YDL059C 717 nt10.54□□□□□ -0.72
TY1B-HO13535 TPI1YDR050C 747 nt10.54□□□□□ -0.72
TY1B-HO13535 NAS6YGR232W 687 nt10.54□□□□□ -0.72
TY1B-HO13535 RPL43AYPR043W 279 nt10.54□□□□□ -0.72
TY1B-HO13535 PMT1YDL095W 2454 nt10.53□□□□□ -0.72
TY1B-HO13535 IVY1YDR229W 1362 nt10.53□□□□□ -0.72
TY1B-HO13535 OM45YIL136W 1182 nt10.53□□□□□ -0.72
TY1B-HO13535 TIF2YJL138C 1188 nt10.52□□□□□ -0.72
TY1B-HO13535 TIF1YKR059W 1188 nt10.52□□□□□ -0.72
TY1B-HO13535 GTS1YGL181W 1191 nt10.52□□□□□ -0.73
TY1B-HO13535 MRPL10YNL284C 969 nt10.52□□□□□ -0.73
TY1B-HO13535 YBR027CYBR027C 333 nt10.52□□□□□ -0.73
TY1B-HO13535 CSL4YNL232W 879 nt10.51□□□□□ -0.73
TY1B-HO13535 PRI1YIR008C 1230 nt10.5□□□□□ -0.73
TY1B-HO13535 YMR279CYMR279C 1623 nt10.5□□□□□ -0.73
TY1B-HO13535 MSP1YGR028W 1089 nt10.49□□□□□ -0.73
TY1B-HO13535 CDC7YDL017W 1524 nt10.49□□□□□ -0.73
TY1B-HO13535 MHT1YLL062C 975 nt10.48□□□□□ -0.73
TY1B-HO13535 YHR213W-BYHR213W-B 300 nt10.47□□□□□ -0.73
TY1B-HO13535 YAR064WYAR064W 300 nt10.47□□□□□ -0.73
TY1B-HO13535 MRPL23YOR150W 492 nt10.47□□□□□ -0.73
TY1B-HO13535 ERG8YMR220W 1356 nt10.47□□□□□ -0.73
TY1B-HO13535 CUP2YGL166W 678 nt10.47□□□□□ -0.73
TY1B-HO13535 YKL077WYKL077W 1179 nt10.47□□□□□ -0.73
TY1B-HO13535 YAL045CYAL045C 309 nt10.47□□□□□ -0.73
TY1B-HO13535 SEN34YAR008W 828 nt10.47□□□□□ -0.73
TY1B-HO13535 PTC7YHR076W 1032 nt10.46□□□□□ -0.74
TY1B-HO13535 SEC62YPL094C 825 nt10.46□□□□□ -0.74
TY1B-HO13535 DUS3YLR401C 2007 nt10.46□□□□□ -0.74
TY1B-HO13535 DSF1YEL070W 1509 nt10.46□□□□□ -0.74
TY1B-HO13535 YNR073CYNR073C 1509 nt10.46□□□□□ -0.74
TY1B-HO13535 SPG5YMR191W 1122 nt10.45□□□□□ -0.74
TY1B-HO13535 YPR196WYPR196W 1413 nt10.44□□□□□ -0.74
TY1B-HO13535 DLD1YDL174C 1764 nt10.44□□□□□ -0.74
TY1B-HO13535 THR1YHR025W 1074 nt10.43□□□□□ -0.74
TY1B-HO13535 YLR157W-EYLR157W-E 165 nt10.43□□□□□ -0.74
TY1B-HO13535 PEX3YDR329C 1326 nt10.42□□□□□ -0.74
TY1B-HO13535 EGD2YHR193C 525 nt10.42□□□□□ -0.74
TY1B-HO13535 UIP5YKR044W 1332 nt10.42□□□□□ -0.74
TY1B-HO13535 DON1YDR273W 1098 nt10.42□□□□□ -0.74
TY1B-HO13535 MSS51YLR203C 1311 nt10.41□□□□□ -0.74
TY1B-HO13535 RNH1YMR234W 1047 nt10.41□□□□□ -0.74
TY1B-HO13535 CTA1YDR256C 1548 nt10.41□□□□□ -0.74
TY1B-HO13535 SUR7YML052W 909 nt10.39□□□□□ -0.75
TY1B-HO13535 HVG1YER039C 750 nt10.39□□□□□ -0.75
TY1B-HO13535 RPL31BYLR406C 342 nt10.39□□□□□ -0.75
TY1B-HO13535 RTC2YBR147W 891 nt10.38□□□□□ -0.75
TY1B-HO13535 YBL113CYBL113C 2379 nt10.37□□□□□ -0.75
TY1B-HO13535 HIS1YER055C 894 nt10.37□□□□□ -0.75
TY1B-HO13535 MPC2YHR162W 390 nt10.37□□□□□ -0.75
TY1B-HO13535 ECM19YLR390W 339 nt10.37□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms