Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Pkd1O08852 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pkd1O08852 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Pkd1O08852 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Pkd1O08852 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.03■□□□□ -0
Pkd1O08852 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC15.03■□□□□ -0
Pkd1O08852 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Pkd1O08852 Gm9959-201ENSMUST00000068277 390 ntBASIC15.02□□□□□ -0.01
Pkd1O08852 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pkd1O08852 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pkd1O08852 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pkd1O08852 Terc-201ENSMUST00000082862 423 ntBASIC15.02□□□□□ -0.01
Pkd1O08852 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pkd1O08852 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pkd1O08852 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC15.01□□□□□ -0.01
Pkd1O08852 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pkd1O08852 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pkd1O08852 Nsd1-203ENSMUST00000224156 1149 ntBASIC15.01□□□□□ -0.01
Pkd1O08852 Gm14121-201ENSMUST00000121441 1380 ntBASIC15.01□□□□□ -0.01
Pkd1O08852 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pkd1O08852 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pkd1O08852 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pkd1O08852 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pkd1O08852 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pkd1O08852 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pkd1O08852 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pkd1O08852 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Pkd1O08852 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pkd1O08852 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pkd1O08852 Gm5297-201ENSMUST00000198555 1171 ntBASIC14.99□□□□□ -0.01
Pkd1O08852 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pkd1O08852 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pkd1O08852 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pkd1O08852 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.98□□□□□ -0.01
Pkd1O08852 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Pkd1O08852 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pkd1O08852 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pkd1O08852 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pkd1O08852 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pkd1O08852 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pkd1O08852 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pkd1O08852 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pkd1O08852 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Pkd1O08852 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Pkd1O08852 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pkd1O08852 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pkd1O08852 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Pkd1O08852 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC14.95□□□□□ -0.02
Pkd1O08852 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Pkd1O08852 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pkd1O08852 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Pkd1O08852 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.94□□□□□ -0.02
Pkd1O08852 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pkd1O08852 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pkd1O08852 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pkd1O08852 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.94□□□□□ -0.02
Pkd1O08852 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.94□□□□□ -0.02
Pkd1O08852 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pkd1O08852 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.93□□□□□ -0.02
Pkd1O08852 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pkd1O08852 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pkd1O08852 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC14.92□□□□□ -0.02
Pkd1O08852 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pkd1O08852 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pkd1O08852 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.92□□□□□ -0.02
Pkd1O08852 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pkd1O08852 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pkd1O08852 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pkd1O08852 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Pkd1O08852 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pkd1O08852 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pkd1O08852 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pkd1O08852 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.91□□□□□ -0.02
Pkd1O08852 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pkd1O08852 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pkd1O08852 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pkd1O08852 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pkd1O08852 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pkd1O08852 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pkd1O08852 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pkd1O08852 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pkd1O08852 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pkd1O08852 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pkd1O08852 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pkd1O08852 Gm44428-201ENSMUST00000204474 874 ntBASIC14.88□□□□□ -0.03
Pkd1O08852 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.88□□□□□ -0.03
Pkd1O08852 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.87□□□□□ -0.03
Pkd1O08852 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pkd1O08852 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pkd1O08852 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pkd1O08852 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.86□□□□□ -0.03
Pkd1O08852 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pkd1O08852 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms