Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm18284-201ENSMUST00000172604 624 ntBASIC13.58□□□□□ -0.23
Herc1E9PZP8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Herc1E9PZP8 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Herc1E9PZP8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Herc1E9PZP8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Herc1E9PZP8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.58□□□□□ -0.24
Herc1E9PZP8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Herc1E9PZP8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Herc1E9PZP8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Herc1E9PZP8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
Herc1E9PZP8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Herc1E9PZP8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herc1E9PZP8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herc1E9PZP8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc1E9PZP8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Herc1E9PZP8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Herc1E9PZP8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Herc1E9PZP8 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herc1E9PZP8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC13.54□□□□□ -0.24
Herc1E9PZP8 Gm9847-201ENSMUST00000052528 599 ntBASIC13.54□□□□□ -0.24
Herc1E9PZP8 Gm9812-201ENSMUST00000061934 968 ntBASIC13.54□□□□□ -0.24
Herc1E9PZP8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Herc1E9PZP8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC13.53□□□□□ -0.24
Herc1E9PZP8 Appbp2os-202ENSMUST00000206972 447 ntBASIC13.53□□□□□ -0.24
Herc1E9PZP8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
Herc1E9PZP8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Herc1E9PZP8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Herc1E9PZP8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Herc1E9PZP8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Herc1E9PZP8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Herc1E9PZP8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Herc1E9PZP8 Gm10232-201ENSMUST00000089221 720 ntBASIC13.51□□□□□ -0.25
Herc1E9PZP8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Herc1E9PZP8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC13.5□□□□□ -0.25
Herc1E9PZP8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herc1E9PZP8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.49□□□□□ -0.25
Herc1E9PZP8 Gm27454-201ENSMUST00000185090 204 ntBASIC13.49□□□□□ -0.25
Herc1E9PZP8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herc1E9PZP8 Gm12821-201ENSMUST00000120022 600 ntBASIC13.49□□□□□ -0.25
Herc1E9PZP8 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Herc1E9PZP8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herc1E9PZP8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herc1E9PZP8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herc1E9PZP8 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herc1E9PZP8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC13.46□□□□□ -0.25
Herc1E9PZP8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herc1E9PZP8 Gm5131-201ENSMUST00000212776 1238 ntBASIC13.45□□□□□ -0.26
Herc1E9PZP8 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Gm2011-201ENSMUST00000203124 1263 ntBASIC13.44□□□□□ -0.26
Herc1E9PZP8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Herc1E9PZP8 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.43□□□□□ -0.26
Herc1E9PZP8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herc1E9PZP8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC13.43□□□□□ -0.26
Herc1E9PZP8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Herc1E9PZP8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms