Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Igkv3-4A0A140T8Q4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Igkv3-4A0A140T8Q4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-4A0A140T8Q4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Igkv3-4A0A140T8Q4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Igkv3-4A0A140T8Q4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-4A0A140T8Q4 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-4A0A140T8Q4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.18□□□□□ -0.14
Igkv3-4A0A140T8Q4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Igkv3-4A0A140T8Q4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Igkv3-4A0A140T8Q4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Igkv3-4A0A140T8Q4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-4A0A140T8Q4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-4A0A140T8Q4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC14.15□□□□□ -0.14
Igkv3-4A0A140T8Q4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Igkv3-4A0A140T8Q4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Igkv3-4A0A140T8Q4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Igkv3-4A0A140T8Q4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-4A0A140T8Q4 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-4A0A140T8Q4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.13□□□□□ -0.15
Igkv3-4A0A140T8Q4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Igkv3-4A0A140T8Q4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Igkv3-4A0A140T8Q4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Igkv3-4A0A140T8Q4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Igkv3-4A0A140T8Q4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Igkv3-4A0A140T8Q4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igkv3-4A0A140T8Q4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Igkv3-4A0A140T8Q4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.08□□□□□ -0.16
Igkv3-4A0A140T8Q4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv3-4A0A140T8Q4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Igkv3-4A0A140T8Q4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms