Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	TSR3	YOR006C	942 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	LEA1	YPL213W	717 nt		7.74	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YBR056W	YBR056W	1506 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	BUD31	YCR063W	474 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)D	tA(AGC)D	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)F	tA(AGC)F	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)G	tA(AGC)G	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)H	tA(AGC)H	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)J	tA(AGC)J	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)K1	tA(AGC)K1	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)K2	tA(AGC)K2	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)L	tA(AGC)L	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)M1	tA(AGC)M1	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)M2	tA(AGC)M2	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	tA(AGC)P	tA(AGC)P	73 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	FLX1	YIL134W	936 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	OMA1	YKR087C	1038 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	SUT2	YPR009W	807 nt		7.73	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	EDC1	YGL222C	528 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YLR198C	YLR198C	360 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	YNR048W	YNR048W	1182 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	ATP4	YPL078C	735 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	CIT3	YPR001W	1461 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	SPR1	YOR190W	1338 nt		7.72	□□□□□ -1.17
TY4B-P	A0A0B7P3V8	RTG3	YBL103C	1461 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	HAT2	YEL056W	1206 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	HIS3	YOR202W	663 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	IPL1	YPL209C	1104 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	PPS1	YBR276C	2424 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	ERG12	YMR208W	1332 nt		7.71	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	MEP1	YGR121C	1479 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YCR025C	YCR025C	411 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	SHO1	YER118C	1104 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	CYC3	YAL039C	810 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	RSF1	YMR030W	1131 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	ARC35	YNR035C	1029 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	UBS1	YBR165W	834 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	AIM3	YBR108W	2844 nt		7.7	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	ABP1	YCR088W	1779 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YOR389W	YOR389W	1875 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	BUD16	YEL029C	939 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	FSH1	YHR049W	732 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YBR226C	YBR226C	411 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	SSC1	YJR045C	1965 nt		7.69	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	DAL4	YIR028W	1908 nt		7.68	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YEL034C-A	YEL034C-A	603 nt		7.68	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	FET4	YMR319C	1659 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YCP4	YCR004C	744 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	ISY1	YJR050W	708 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	SRP102	YKL154W	735 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YLR280C	YLR280C	351 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	TAF11	YML015C	1041 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	CLB5	YPR120C	1308 nt		7.67	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	CHS7	YHR142W	951 nt		7.66	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	TFB4	YPR056W	1017 nt		7.66	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	NUR1	YDL089W	1455 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	YER137C	YER137C	447 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	PDC6	YGR087C	1692 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	JJJ3	YJR097W	519 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	AIM2	YAL049C	741 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	ADD66	YKL206C	804 nt		7.65	□□□□□ -1.18
TY4B-P	A0A0B7P3V8	TRP4	YDR354W	1143 nt		7.64	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MMS2	YGL087C	414 nt		7.64	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	SLG1	YOR008C	1137 nt		7.64	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	OLA1	YBR025C	1185 nt		7.64	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	CDS1	YBR029C	1374 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	FZF1	YGL254W	900 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	SRL2	YLR082C	1179 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YET2	YMR040W	483 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	ERG29	YMR134W	714 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	GFD1	YMR255W	567 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YOL038C-A	YOL038C-A	96 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	ERO1	YML130C	1692 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	ECM30	YLR436C	3825 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	INO1	YJL153C	1602 nt		7.63	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MED2	YDL005C	1296 nt		7.62	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YLR285C-A	YLR285C-A	171 nt		7.62	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	RCE1	YMR274C	948 nt		7.62	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MET22	YOL064C	1074 nt		7.62	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YBR138C	YBR138C	1575 nt		7.62	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	VBA5	YKR105C	1749 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	TIF3	YPR163C	1311 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YEL050W-A	YEL050W-A	192 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	RRT6	YGL146C	936 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YGR068W-A	YGR068W-A	96 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YNL140C	YNL140C	570 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	PCL1	YNL289W	840 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MGR3	YMR115W	1506 nt		7.61	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	NUF2	YOL069W	1356 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MPA43	YNL249C	1629 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YIA6	YIL006W	1122 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	ERV41	YML067C	1059 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	RNA170	RNA170	169 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	MER1	YNL210W	813 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	TGL5	YOR081C	2250 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	YLL058W	YLL058W	1728 nt		7.6	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	HAT1	YPL001W	1125 nt		7.59	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	SAS4	YDR181C	1446 nt		7.59	□□□□□ -1.19
TY4B-P	A0A0B7P3V8	ATF1	YOR377W	1578 nt		7.59	□□□□□ -1.2
TY4B-P	A0A0B7P3V8	EHT1	YBR177C	1356 nt		7.59	□□□□□ -1.2

Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms